RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SPSB2Q99619 263 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 NAPGQ99747 312 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 NUDT9Q9BW91 350 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 PCBD2Q9H0N5 130 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ZNF304Q9HCX3 659 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 SLC6A20Q9NP91 592 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 SLC22A11Q9NSA0 550 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 P4HTMQ9NXG6 502 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 TAS2R13Q9NYV9 303 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 C5AR2Q9P296 337 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 RNF14Q9UBS8 474 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 ZNF282Q9UDV7 671 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 ZC3H7BQ9UGR2 993 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 TAC3Q9UHF0 121 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 TRMT6Q9UJA5 497 aaKnown RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 CDC23Q9UJX2 597 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 CORO1CQ9ULV4 474 aaPredicted RBP4.57□□□□□ -1.68
CLK3-219ENST00000567805 PLAAQ9Y263 795 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 SAR1BQ9Y6B6 198 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 SHANK1Q9Y566 2161 aa4.57□□□□□ -1.68
CLK3-219ENST00000567805 UTP20O75691 2785 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 IGLV3-12A0A075B6K2 115 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 LOC105369274A0A096LPK9 316 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 LOC102723532A0A0G2JNH3 316 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PABPN1LA6NDY0 278 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 TTLL8A6PVC2 850 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 TXNDC9O14530 226 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SOCS6O14544 535 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 NDC80O14777 642 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PCDH17O14917 1159 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SLC16A5O15375 505 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 TTI1O43156 1089 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 VPS4BO75351 444 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 BANF1O75531 89 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SEC31AO94979 1220 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 MED26O95402 600 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 AHSGP02765 367 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ZGLP1P0C6A0 271 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 FBLP22087 321 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 CCND1P24385 295 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 HRH2P25021 359 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 VARSP26640 1264 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 GABRB3P28472 473 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 IMPA1P29218 277 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SLC26A3P40879 764 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ELK3P41970 407 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CARSP49589 748 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 ITGA8P53708 1063 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CDKN2DP55273 166 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ARL4CP56559 192 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 FOXL2P58012 376 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 IL2P60568 153 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 RPS15AP62244 130 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 TBPL1P62380 186 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 YBX1P67809 324 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 TIAL1Q01085 375 aaKnown RBP eCLIP4.56□□□□□ -1.68
CLK3-219ENST00000567805 OCA2Q04671 838 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 RAPSNQ13702 412 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 FRG1Q14331 258 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 TUBB8Q3ZCM7 444 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 NADK2Q4G0N4 442 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 COLEC12Q5KU26 742 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 RBM20Q5T481 1227 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 TEDDM1Q5T9Z0 273 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 THEMIS2Q5TEJ8 643 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PRAMEF13Q5VWM6 474 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 STEAP4Q687X5 459 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SLC6A19Q695T7 634 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 FAM45BPQ6NSW5 357 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 HIBCHQ6NVY1 386 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 PAQR3Q6TCH7 311 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 IGFL3Q6UXB1 125 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CLEC18BQ6UXF7 455 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PIWIL4Q7Z3Z4 852 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 ADCK2Q7Z695 626 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 IGDCC3Q8IVU1 814 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 KLHL7Q8IXQ5 586 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 LRRC56Q8IYG6 542 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 OR4N4Q8N0Y3 316 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 MYO1HQ8N1T3 1032 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 DTWD1Q8N5C7 304 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 METTL27Q8N6F8 245 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 CSNK1A1LQ8N752 337 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 RBMXL3Q8N7X1 1067 aaKnown RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 CLEC18CQ8NCF0 446 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 FAM45AQ8TCE6 357 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CPT1CQ8TCG5 803 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 STT3BQ8TCJ2 826 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 MCOLN3Q8TDD5 553 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 EEF1AKMT1Q8WVE0 214 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.56□□□□□ -1.68
CLK3-219ENST00000567805 TM9SF4Q92544 642 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 COL26A1Q96A83 441 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 PNPLA2Q96AD5 504 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 MIEF2Q96C03 454 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CFAP36Q96G28 342 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 SNF8Q96H20 258 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 CABS1Q96KC9 395 aa4.56□□□□□ -1.68
CLK3-219ENST00000567805 OR2A5Q96R48 311 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms