RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PLEKHS1Q5SXH7 462 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 KDM4DQ6B0I6 523 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 GALNT18Q6P9A2 607 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 MBOAT1Q6ZNC8 495 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 USP45Q70EL2 814 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 FRS2Q8WU20 508 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SGCDQ92629 289 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SPATA9Q9BWV2 254 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 NECTIN3Q9NQS3 549 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 THG1LQ9NWX6 298 aaKnown RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SH3GLB1Q9Y371 365 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 NPIPB15A6NHN6 443 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 GFYI3L273 518 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 KPNA5O15131 536 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 ANGPTL1O95841 491 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 OCM2P0CE71 109 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 OCMP0CE72 109 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 AMD1P17707 334 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 GPX2P18283 190 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 FPR1P21462 350 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 SNRPD1P62314 119 aaKnown RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 MVKQ03426 396 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 OCA2Q04671 838 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 CSTF3Q12996 717 aaKnown RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 KCNC3Q14003 757 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 NR1D2Q14995 579 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 RGS21Q2M5E4 152 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 GPR155Q7Z3F1 870 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 CENPSQ8N2Z9 138 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 C10orf111Q8N326 155 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 ABHD11Q8NFV4 315 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 FAR1Q8WVX9 515 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 STARD8Q92502 1023 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 BHMTQ93088 406 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 WDR12Q9GZL7 423 aaKnown RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 CCNB1IP1Q9NPC3 277 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 AASDHPPTQ9NRN7 309 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 PAK1IP1Q9NWT1 392 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-213ENST00000566756 CLEC4EQ9ULY5 219 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 PLXNB3Q9ULL4 1909 aa16.25■□□□□ 0.19
CMTM3-213ENST00000566756 A0A1W2PQ67 120 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 CLDN25C9JDP6 229 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 JRKO75564 520 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 FKBP9O95302 570 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 PRKACGP22612 351 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 SLC35A2P78381 396 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 NTHL1P78549 312 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 B4GALNT1Q00973 533 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 AQP6Q13520 282 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 RAPSNQ13702 412 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 VMACQ2NL98 169 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 FRG2Q64ET8 278 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 NIPAL1Q6NVV3 410 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 DOK6Q6PKX4 331 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 PIWIL3Q7Z3Z3 882 aaKnown RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 ADGRD2Q7Z7M1 963 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 ZSWIM9Q86XI8 627 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 RASGRP3Q8IV61 690 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 S100ZQ8WXG8 99 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 MTFMTQ96DP5 389 aaKnown RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 TSSK3Q96PN8 268 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 FRG2BQ96QU4 278 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 APOL4Q9BPW4 351 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 HMG20AQ9NP66 347 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 LTB4R2Q9NPC1 389 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 DNAJC11Q9NVH1 559 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 FAM120CQ9NX05 1096 aaKnown RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 SCN3BQ9NY72 215 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 INTS6Q9UL03 887 aaKnown RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 MAPRE3Q9UPY8 281 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 COQ6Q9Y2Z9 468 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 PIKFYVEQ9Y2I7 2098 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 MYCLP1P12525 358 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 JUPP14923 745 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 CYP2A7P20853 494 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 CD70P32970 193 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 CDKN2CP42773 168 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 IL5RAQ01344 420 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 EMX1Q04741 257 aaPredicted RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 VEZF1Q14119 521 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 SPCS2Q15005 226 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 DUSP6Q16828 381 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 PGS1Q32NB8 556 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 LIPJQ5W064 366 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 ANKRD34AQ69YU3 496 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 NOXRED1Q6NXP6 359 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 TSPAN33Q86UF1 283 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 CYP4Z1Q86W10 505 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 SVOPQ8N4V2 548 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 OR8J2Q8NGG1 315 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 RORBQ92753 470 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 IRF7Q92985 503 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 VOPP1Q96AW1 172 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 ASIC4Q96FT7 647 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 CPEB1Q9BZB8 566 aaKnown RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 VNN3Q9NY84 501 aa16.24■□□□□ 0.19
CMTM3-213ENST00000566756 MRPS23Q9Y3D9 190 aaKnown RBP16.24■□□□□ 0.19
CMTM3-213ENST00000566756 C2orf16Q68DN1 1984 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms