RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 PGDP52209 483 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 AP1S2P56377 157 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 SOX8P57073 446 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 CAV1Q03135 178 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 CHAF1BQ13112 559 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 NKG7Q16617 165 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 PHKG1Q16816 387 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 THEMIS2Q5TEJ8 643 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 AGTRAPQ6RW13 159 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 COX15Q7KZN9 410 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 HPS6Q86YV9 775 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 ZBED8Q8IZ13 594 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 GPATCH11Q8N954 259 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 PYROXD1Q8WU10 500 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 HIST1H2AHQ96KK5 128 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 FER1L6-AS2Q96M78 137 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 OLFM1Q99784 485 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 HIST1H2AJQ99878 128 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 MCMBPQ9BTE3 642 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 H2AFJQ9BTM1 129 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 SGPP1Q9BX95 441 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 TRIM54Q9BYV2 358 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 ZNF304Q9HCX3 659 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 P4HTMQ9NXG6 502 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 CDC14AQ9UNH5 594 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 UTP11Q9Y3A2 253 aaKnown RBP12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 HIVEP3Q5T1R4 2406 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 IGLV3-12A0A075B6K2 115 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 H7BY64 318 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 PEX12O00623 359 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 WISP1O95388 367 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 MED26O95402 600 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 PDGFAP04085 211 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 EIF2S1P05198 315 aaKnown RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 ENO2P09104 434 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 GSTA2P09210 222 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 ZNF37AP17032 561 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 NR1D1P20393 614 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 OR1D4P47884 311 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 TBPL1P62380 186 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 MRPS25P82663 173 aaKnown RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 TLE1Q04724 770 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 C2orf54Q08AI8 447 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 FAM53BQ14153 422 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 DCAF10Q5QP82 559 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 PPP1R32Q7Z5V6 425 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 STRA8Q7Z7C7 330 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 ARHGEF39Q8N4T4 335 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 CSNK1A1LQ8N752 337 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 RERGQ96A58 199 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 C10orf90Q96M02 699 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 PRAP1Q96NZ9 151 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 SPSB2Q99619 263 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 FAM129AQ9BZQ8 928 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 RAB17Q9H0T7 212 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 DPH5Q9H2P9 285 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 RHOJQ9H4E5 214 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 SYNPO2LQ9H987 977 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 CUEDC1Q9NWM3 386 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 G3BP2Q9UN86 482 aaKnown RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 ZNF451Q9Y4E5 1061 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 ZGRF1Q86YA3 2104 aa12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 SPTBN1Q01082 2364 aaKnown RBP12.05□□□□□ -0.48
LPCAT4-206ENST00000566581 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 AGPSO00116 658 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 HAT1O14929 419 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 KLHL41O60662 606 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 NPPBP16860 134 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 RPS15AP62244 130 aaKnown RBP12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 OCA2Q04671 838 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 NAE1Q13564 534 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 ZXDCQ2QGD7 858 aaPredicted RBP12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 CAPN13Q6MZZ7 669 aaPredicted RBP12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 LCTLQ6UWM7 567 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 MBOAT1Q6ZNC8 495 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 C17orf64Q86WR6 236 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 DTWD1Q8N5C7 304 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 NKAPQ8N5F7 415 aaKnown RBP12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 CLEC1AQ8NC01 280 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 FDCSPQ8NFU4 85 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 OR56A3Q8NH54 315 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 ATL1Q8WXF7 558 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 FBXL8Q96CD0 374 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 VPS39Q96JC1 886 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 CABS1Q96KC9 395 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 SMAD5Q99717 465 aaKnown RBP12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 HAUS8Q9BT25 410 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 ATG10Q9H0Y0 220 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 EPN3Q9H201 632 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 POPDC3Q9HBV1 291 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 SAYSD1Q9NPB0 183 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 SEMA3GQ9NS98 782 aa12.04□□□□□ -0.48
LPCAT4-206ENST00000566581 ARL15Q9NXU5 204 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms