RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 MRPS25P82663 173 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 MC1RQ01726 317 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CTTNQ14247 550 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SMN1Q16637 294 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PAPPA-AS1Q5QFB9 102 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF425Q6IV72 752 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CCDC137Q6PK04 289 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ASRGL1Q7L266 308 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PCGF5Q86SE9 256 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF677Q86XU0 584 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ZBTB2Q8N680 514 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PRELID2Q8N945 189 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 LEMD2Q8NC56 503 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 HUS1BQ8NHY5 278 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 OLIG1Q8TAK6 271 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 DEPDC1BQ8WUY9 529 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 KIFAP3Q92845 792 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CD101Q93033 1021 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 TMEM18Q96B42 140 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SNF8Q96H20 258 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF778Q96MU6 729 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 DPH5Q9H2P9 285 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 RABEP2Q9H5N1 569 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 MAGEE1Q9HCI5 957 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 VAT1LQ9HCJ6 419 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 FBRSL1Q9HCM7 1045 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SMYD2Q9NRG4 433 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 NRBP2Q9NSY0 501 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 NCKIPSDQ9NZQ3 722 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 NDRG3Q9UGV2 375 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 BAIAP2L1Q9UHR4 511 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 VPS28Q9UK41 221 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ALG6Q9Y672 507 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CACNA1BQ00975 2339 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 MKI67P46013 3256 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 IGKV6D-21A0A0A0MT36 114 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 A0A1W2PQ09 198 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 E9PAM4 449 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 PRPF4O43172 522 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ZC3H11AO75152 810 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 PGM3O95394 542 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 TTC4O95801 387 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 KRT10P13645 584 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 GLUD2P49448 558 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 DNA2P51530 1060 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 MFAP3P55082 362 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 SELENOVP59797 346 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ELAVL2Q12926 359 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 BFSP1Q12934 665 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 TRADDQ15628 312 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 LRIF1Q5T3J3 769 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 RHBDF2Q6PJF5 856 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 C4orf50Q6ZRC1 276 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 Q6ZTK2 550 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF410Q86VK4 478 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 LMNTD2Q8IXW0 634 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ARFGAP1Q8N6T3 406 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 CCDC89Q8N998 374 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 FBXO25Q8TCJ0 367 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ARHGEF2Q92974 986 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ELSPBP1Q96BH3 223 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 TRIM51Q9BSJ1 452 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 PI4K2AQ9BTU6 479 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 STRA6Q9BX79 667 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 FRMD8P1Q9BZ68 369 aaPredicted RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 GCOM2Q9BZD3 368 aaPredicted RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 GPR88Q9GZN0 384 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 LRMDAQ9H2I8 198 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ECT2Q9H8V3 914 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 SAR1AQ9NR31 198 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 EXOC7Q9UPT5 735 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 FAM96BQ9Y3D0 163 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 USH1CQ9Y6N9 552 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 SZT2Q5T011 3432 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 PTPRZ1P23471 2315 aaPredicted RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 TYW5A2RUC4 315 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 LIPT2A6NK58 231 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF197O14709 1029 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ANP32DO95626 131 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 TFP02787 698 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 CBSLP0DN79 551 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 AXLP30530 894 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 GCH1P30793 250 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 CBSP35520 551 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 MSH2P43246 934 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 RPL21P46778 160 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 PRPF4BQ13523 1007 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 UBE2SQ16763 222 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 SGSM1Q2NKQ1 1148 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 STPG1Q5TH74 334 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 LRCH2Q5VUJ6 765 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 C1orf186Q6ZWK4 172 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF720Q7Z2F6 126 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 MRPL10Q7Z7H8 261 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ZCCHC9Q8N567 271 aaKnown RBP4.1□□□□□ -1.75
LINC00561-201ENST00000565815 SAAL1Q96ER3 474 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 CFAP57Q96MR6 1250 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 ACCSQ96QU6 501 aa4.1□□□□□ -1.75
LINC00561-201ENST00000565815 PRMT1Q99873 361 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms