RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TBPL1P62380 186 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 Q0VFX4 171 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 MRPL49Q13405 166 aaKnown RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 RBBP7Q16576 425 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 BBS9Q3SYG4 887 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 TUBB8Q3ZCM7 444 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 VWA2Q5GFL6 755 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 SPANXN3Q5MJ09 141 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 HP1BP3Q5SSJ5 553 aaPredicted RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 THEMIS2Q5TEJ8 643 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 PRAMEF13Q5VWM6 474 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 UBE2R2Q712K3 238 aaPredicted RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 ADCK2Q7Z695 626 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 CREG2Q8IUH2 290 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 PLD3Q8IV08 490 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 AMER3Q8N944 861 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 EEF1AKMT1Q8WVE0 214 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 C19orf60Q96EN9 201 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 PWWP2AQ96N64 755 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 ZNF282Q9UDV7 671 aaPredicted RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 TRMT6Q9UJA5 497 aaKnown RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 C3orf18Q9UK00 162 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 SH2B3Q9UQQ2 575 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 PDE10AQ9Y233 779 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 B3GNT3Q9Y2A9 372 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 CSAG2Q9Y5P2 127 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 A0A0A6YYC8 382 aaPredicted RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 H7BY64 318 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 I3L1I5 382 aaPredicted RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 FOXS1O43638 330 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 TTC4O95801 387 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 TSPAN12O95859 305 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 AHSGP02765 367 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 CARSP49589 748 aaKnown RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 ABATP80404 500 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 RELAQ04206 551 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 OCA2Q04671 838 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 DSG2Q14126 1118 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 ESPL1Q14674 2120 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 HIF1AQ16665 826 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 PHKG1Q16816 387 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 SYT16Q17RD7 645 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 TRMT10BQ6PF06 316 aaKnown RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 PAQR3Q6TCH7 311 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 Q6ZS92 163 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 KLHL7Q8IXQ5 586 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 PARP9Q8IXQ6 854 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 RERGQ96A58 199 aaPredicted RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 MIEF2Q96C03 454 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 C8orf44Q96CB5 159 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 SNRNP40Q96DI7 357 aaKnown RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 MVB12AQ96EY5 273 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 MMABQ96EY8 250 aaPredicted RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 CERS2Q96G23 380 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 CFAP36Q96G28 342 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 PRAP1Q96NZ9 151 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 TRIM51Q9BSJ1 452 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 NAT9Q9BTE0 207 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 ILKAPQ9H0C8 392 aaPredicted RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 CCDC177Q9NQR7 707 aaPredicted RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 UTP6Q9NYH9 597 aaKnown RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 TAS2R13Q9NYV9 303 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 TRPC4Q9UBN4 977 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 CHMP2BQ9UQN3 213 aa9.54□□□□□ -0.88
CMTM3-209ENST00000565003 MRPS2Q9Y399 296 aaKnown RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 SPTAN1Q13813 2472 aaKnown RBP9.54□□□□□ -0.88
CMTM3-209ENST00000565003 USP9YO00507 2555 aaPredicted RBP9.53□□□□□ -0.88
CMTM3-209ENST00000565003 BLACEA4D250 179 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 IDSB3KWA1 339 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 MAP2K7O14733 419 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 FANCGO15287 622 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 TP73O15350 636 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 PRPF4O43172 522 aaKnown RBP eCLIP9.53□□□□□ -0.88
CMTM3-209ENST00000565003 KLHL41O60662 606 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 SEMA7AO75326 666 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 C8GP07360 202 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 RNF224P0DH78 156 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 COX6A1P12074 109 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 ACPPP15309 386 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 SLC26A3P40879 764 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 ELK3P41970 407 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 RGS4P49798 205 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 EFNA3P52797 238 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 GNG11P61952 73 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 DR1Q01658 176 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 SP140Q13342 867 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 MORF4L2Q15014 288 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 ZXDCQ2QGD7 858 aaPredicted RBP9.53□□□□□ -0.88
CMTM3-209ENST00000565003 CRB2Q5IJ48 1285 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 TEDDM1Q5T9Z0 273 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 GARNL3Q5VVW2 1013 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 ATG9BQ674R7 924 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 LRRC8EQ6NSJ5 796 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 UGT3A1Q6NUS8 523 aa9.53□□□□□ -0.88
CMTM3-209ENST00000565003 HIBCHQ6NVY1 386 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms