RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CTBP1Q13363 440 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 MRPL49Q13405 166 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 NR6A1Q15406 480 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 ANKRD22Q5VYY1 191 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 SUSD1Q6UWL2 747 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 RIPOR1Q6ZS17 1223 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 PCGF5Q86SE9 256 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 ST6GALNAC3Q8NDV1 305 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 MCOLN3Q8TDD5 553 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 ACTRT1Q8TDG2 376 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 ZNF480Q8WV37 535 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 FAM136AQ96C01 138 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 THOC3Q96J01 351 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 SIGLEC10Q96LC7 697 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 C10orf90Q96M02 699 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 CCDC138Q96M89 665 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 FAM167BQ9BTA0 163 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 NAT9Q9BTE0 207 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 ZBTB20Q9HC78 741 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 C20orf96Q9NUD7 363 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 TMEM184CQ9NVA4 438 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 FBXO5Q9UKT4 447 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 SLC5A6Q9Y289 635 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 IGKV1-8A0A0C4DH67 115 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 SMAPO00193 183 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 SLC16A5O15375 505 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 KIF5CO60282 957 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 MED26O95402 600 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 SERPINA7P05543 415 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 RGS4P49798 205 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 MFAP5Q13361 173 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 ZNF169Q14929 603 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 ZNF549Q6P9A3 640 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 SHISA6Q6ZSJ9 500 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 TMEM151BQ8IW70 566 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 DENND6AQ8IWF6 608 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 PALM2Q8IXS6 379 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 LRRC56Q8IYG6 542 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 ARHGEF39Q8N4T4 335 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 METTL27Q8N6F8 245 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 NAT8LQ8N9F0 302 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 HAS2Q92819 552 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 DRC3Q9H069 523 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 FBXO6Q9NRD1 293 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 TRPC4Q9UBN4 977 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 NOVA2Q9UNW9 492 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 RUVBL1Q9Y265 456 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 MED16Q9Y2X0 877 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 MAD1L1Q9Y6D9 718 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 MDC1Q14676 2089 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 NUP210LQ5VU65 1888 aa11.59□□□□□ -0.55
GTF3C1-204ENST00000564664 NOTCH2Q04721 2471 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 LOC102723996A0A087X1L8 192 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 KRT87PA6NCN2 255 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 IDSB3KWA1 339 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 H0YIG0 161 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 GOLGA8MH3BSY2 632 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 MASP2O00187 686 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 HAUS5O94927 633 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 BMP10O95393 424 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 SYF2O95926 243 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 C8GP07360 202 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 HEXBP07686 556 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 EDN3P14138 238 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 PGAM1P18669 254 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 CCND1P24385 295 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 SLC1A2P43004 574 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 AVPR1BP47901 424 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 TERF1P54274 439 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 RPS15AP62244 130 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 YBX1P67809 324 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 Q0VFX4 171 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 TSTA3Q13630 321 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 HIF1AQ16665 826 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 HSP90AA5PQ58FG0 334 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 VWA2Q5GFL6 755 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 THEMIS2Q5TEJ8 643 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 KIAA0408Q6ZU52 694 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 UBE2R2Q712K3 238 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 GALNT7Q86SF2 657 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 LAPTM4BQ86VI4 370 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 KCNMB4Q86W47 210 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 GIMAP7Q8NHV1 300 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 CD200R1Q8TD46 325 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 FAR1Q8WVX9 515 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 MMABQ96EY8 250 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 MS4A14Q96JA4 679 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 C5orf34Q96MH7 638 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 GPR21Q99679 349 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 SLC30A3Q99726 388 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 AARSD1Q9BTE6 412 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 YIPF2Q9BWQ6 316 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 PARVBQ9HBI1 364 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 ZNF160Q9HCG1 818 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms