RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TSR3Q9UJK0 312 aaKnown RBP14.29□□□□□ -0.12
SPG7-210ENST00000564409 C3orf18Q9UK00 162 aa14.29□□□□□ -0.12
SPG7-210ENST00000564409 MED16Q9Y2X0 877 aa14.29□□□□□ -0.12
SPG7-210ENST00000564409 IGKV1-8A0A0C4DH67 115 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 GOLGA8MH3BSY2 632 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 SMAPO00193 183 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 MED26O95402 600 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 CYC1P08574 325 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 ANXA5P08758 320 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 SLC26A3P40879 764 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 TSFMP43897 325 aaKnown RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 RGS4P49798 205 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 TSTA3Q13630 321 aaPredicted RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 ELOAQ14241 798 aaKnown RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 TLR1Q15399 786 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 CYHR1Q6ZMK1 362 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 SHISA6Q6ZSJ9 500 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 NDUFAF7Q7L592 441 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 TMEM151BQ8IW70 566 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 KBTBD2Q8IY47 623 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 METTL27Q8N6F8 245 aaPredicted RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 GIMAP7Q8NHV1 300 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 CD200R1Q8TD46 325 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 THAP11Q96EK4 314 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 THOC3Q96J01 351 aaKnown RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 OSBPL9Q96SU4 736 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 GPR21Q99679 349 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 SLC30A3Q99726 388 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 AARSD1Q9BTE6 412 aaKnown RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 DRC3Q9H069 523 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 FBXO6Q9NRD1 293 aaPredicted RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 TMEM184CQ9NVA4 438 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 TAS2R13Q9NYV9 303 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 TRPC4Q9UBN4 977 aa14.28□□□□□ -0.12
SPG7-210ENST00000564409 RUVBL1Q9Y265 456 aaKnown RBP14.28□□□□□ -0.12
SPG7-210ENST00000564409 KCNE1BA0A087WTH5 132 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 NRP2O60462 931 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 C8GP07360 202 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 PGAM1P18669 254 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 CCND1P24385 295 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 GLRBP48167 497 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 EMP2P54851 167 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 YBX1P67809 324 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 SP140Q13342 867 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 MFAP5Q13361 173 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 MRPL49Q13405 166 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 CUL1Q13616 776 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 NR6A1Q15406 480 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 PPP1R7Q15435 360 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 EIF2S3LQ2VIR3 472 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 HSP90AA5PQ58FG0 334 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 RNASEH2BQ5TBB1 312 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 THEMIS2Q5TEJ8 643 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 RIPOR1Q6ZS17 1223 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 KIAA0408Q6ZU52 694 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 UBE2R2Q712K3 238 aaPredicted RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 GALNT7Q86SF2 657 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 CUZD1Q86UP6 607 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 KCNMB4Q86W47 210 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 PARP9Q8IXQ6 854 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 PALM2Q8IXS6 379 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 LRRC56Q8IYG6 542 aaPredicted RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 PRR7Q8TB68 274 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 DNAJB14Q8TBM8 379 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 SLCO2A1Q92959 643 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 C19orf60Q96EN9 201 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 CCDC138Q96M89 665 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 TRIM56Q9BRZ2 755 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 ZBTB20Q9HC78 741 aaPredicted RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 CCDC177Q9NQR7 707 aaPredicted RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 PLEKHB1Q9UF11 243 aaPredicted RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 PCYOX1Q9UHG3 505 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 TRMT6Q9UJA5 497 aaKnown RBP14.27□□□□□ -0.13
SPG7-210ENST00000564409 ZGRF1Q86YA3 2104 aa14.27□□□□□ -0.13
SPG7-210ENST00000564409 SVILO95425 2214 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 SCN2AQ99250 2005 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 NSG1A0A0A6YYJ2 146 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 ANKUB1A6NFN9 424 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 IDSB3KWA1 339 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 H0YIG0 161 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 MASP2O00187 686 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 SLC16A5O15375 505 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 SEMA7AO75326 666 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 HAUS5O94927 633 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 ICAM2P13598 275 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 AVPR1BP47901 424 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 RPS15AP62244 130 aaKnown RBP14.26□□□□□ -0.13
SPG7-210ENST00000564409 ZNF169Q14929 603 aaPredicted RBP14.26□□□□□ -0.13
SPG7-210ENST00000564409 VWA2Q5GFL6 755 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 RPUSD3Q6P087 351 aaKnown RBP14.26□□□□□ -0.13
SPG7-210ENST00000564409 ARHGEF39Q8N4T4 335 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 AMER3Q8N944 861 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 C2CD4AQ8NCU7 369 aaPredicted RBP14.26□□□□□ -0.13
SPG7-210ENST00000564409 ST6GALNAC3Q8NDV1 305 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 MMABQ96EY8 250 aaPredicted RBP14.26□□□□□ -0.13
SPG7-210ENST00000564409 PARVBQ9HBI1 364 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 RIC8BQ9NVN3 520 aa14.26□□□□□ -0.13
SPG7-210ENST00000564409 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms