RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PALM2Q8IXS6 379 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 MYO1HQ8N1T3 1032 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 EEF1AKMT1Q8WVE0 214 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 C8orf44Q96CB5 159 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 MMABQ96EY8 250 aaPredicted RBP16.84■□□□□ 0.29
NME3-205ENST00000563854 VPS50Q96JG6 964 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 PWWP2AQ96N64 755 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 EBNA1BP2Q99848 306 aaKnown RBP16.84■□□□□ 0.29
NME3-205ENST00000563854 SLC29A3Q9BZD2 475 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 CCDC177Q9NQR7 707 aaPredicted RBP16.84■□□□□ 0.29
NME3-205ENST00000563854 ENAMQ9NRM1 1142 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 TAS2R13Q9NYV9 303 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 C3orf18Q9UK00 162 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 ADAMTS6Q9UKP5 1117 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 CDC14AQ9UNH5 594 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 CHMP2BQ9UQN3 213 aa16.84■□□□□ 0.29
NME3-205ENST00000563854 BLACEA4D250 179 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 H7BY64 318 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 MAP2K7O14733 419 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 P2RX6O15547 441 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 PRPF4O43172 522 aaKnown RBP eCLIP16.83■□□□□ 0.286e-8■□□□□ 8.9
NME3-205ENST00000563854 AGFG2O95081 481 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 TTC4O95801 387 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 ANXA5P08758 320 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 ACPPP15309 386 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 SKIV2L2P42285 1042 aaKnown RBP16.83■□□□□ 0.28
NME3-205ENST00000563854 GNG11P61952 73 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 MRPL49Q13405 166 aaKnown RBP16.83■□□□□ 0.28
NME3-205ENST00000563854 HIF1AQ16665 826 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 FHL5Q5TD97 284 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 FAAH2Q6GMR7 532 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 IGDCC3Q8IVU1 814 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 CISD2Q8N5K1 135 aaKnown RBP16.83■□□□□ 0.28
NME3-205ENST00000563854 GPATCH11Q8N954 259 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 OR11G2Q8NGC1 345 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 MCOLN3Q8TDD5 553 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 NACC2Q96BF6 587 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 C19orf60Q96EN9 201 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 LINGO1Q96FE5 620 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 CERS2Q96G23 380 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 PRAP1Q96NZ9 151 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 OR2A5Q96R48 311 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 TRIM51Q9BSJ1 452 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 ZNF160Q9HCG1 818 aa16.83■□□□□ 0.28
NME3-205ENST00000563854 PTPN13Q12923 2485 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 DOPEY2Q9Y3R5 2298 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 PCM1Q15154 2024 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 A0A0A6YYC8 382 aaPredicted RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 CLEC18AA5D8T8 446 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 PABPN1LA6NDY0 278 aaKnown RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 I3L1I5 382 aaPredicted RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 EIF3FO00303 357 aaPredicted RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 GLRBP48167 497 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 CDKN2DP55273 166 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 DR1Q01658 176 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 DSG2Q14126 1118 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 LRRC8EQ6NSJ5 796 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 PAQR3Q6TCH7 311 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 CLEC18BQ6UXF7 455 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 LRRC56Q8IYG6 542 aaPredicted RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 CLEC18CQ8NCF0 446 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 SNRNP40Q96DI7 357 aaKnown RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 THOC3Q96J01 351 aaKnown RBP16.82■□□□□ 0.28
NME3-205ENST00000563854 CNDP1Q96KN2 507 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 NAT9Q9BTE0 207 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 TRIM31Q9BZY9 425 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 DRC3Q9H069 523 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 ATG10Q9H0Y0 220 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 PDE10AQ9Y233 779 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 CSAG2Q9Y5P2 127 aa16.82■□□□□ 0.28
NME3-205ENST00000563854 ANKRD12Q6UB98 2062 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 TCP11X1B4DZS4 312 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 C8GP07360 202 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 UQCRHP07919 91 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 GABRB3P28472 473 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 ELK3P41970 407 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 PGGT1BP53609 377 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 EMP2P54851 167 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 SOX8P57073 446 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 MAT1AQ00266 395 aaKnown RBP16.81■□□□□ 0.28
NME3-205ENST00000563854 TIAL1Q01085 375 aaKnown RBP eCLIP16.81■□□□□ 0.28
NME3-205ENST00000563854 EEF1A2Q05639 463 aaKnown RBP16.81■□□□□ 0.28
NME3-205ENST00000563854 PDAP1Q13442 181 aaKnown RBP16.81■□□□□ 0.28
NME3-205ENST00000563854 SYT16Q17RD7 645 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 AGAP7PQ5VUJ5 663 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 IGFL3Q6UXB1 125 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 LAPTM4BQ86VI4 370 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
NME3-205ENST00000563854 SLCO2A1Q92959 643 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 MVB12AQ96EY5 273 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 AGAP4Q96P64 663 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 WDR77Q9BQA1 342 aaPredicted RBP16.81■□□□□ 0.28
NME3-205ENST00000563854 LHPPQ9H008 270 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 ASF1BQ9NVP2 202 aa16.81■□□□□ 0.28
NME3-205ENST00000563854 IDSB3KWA1 339 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 TXNDC9O14530 226 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 HPP00738 406 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 AHSGP02765 367 aa16.8■□□□□ 0.28
NME3-205ENST00000563854 HEXBP07686 556 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms