RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CREG1O75629 220 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 PRSS23O95084 383 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 PTTG1O95997 202 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 SOD2P04179 222 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 FABP3P05413 133 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 ATF6P18850 670 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 HOXD9P28356 352 aaPredicted RBP10.15□□□□□ -0.78
RNF40-204ENST00000563683 PIGFQ07326 219 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 USP39Q53GS9 565 aaKnown RBP10.15□□□□□ -0.78
RNF40-204ENST00000563683 ZNF648Q5T619 568 aaPredicted RBP10.15□□□□□ -0.78
RNF40-204ENST00000563683 GPR153Q6NV75 609 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 UTS2BQ765I0 119 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 PRSS48Q7RTY5 328 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 NDNFQ8TB73 568 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 ZHX1-C8orf76Q96EF9 292 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 BBS4Q96RK4 519 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 TCF25Q9BQ70 676 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 IGFLR1Q9H665 355 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 CARD8Q9Y2G2 431 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 NAALAD2Q9Y3Q0 740 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 COL11A1P12107 1806 aaPredicted RBP10.15□□□□□ -0.78
RNF40-204ENST00000563683 A8MU76 341 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 FAM220BPB1ANY3 271 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 TNFRSF10AO00220 468 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 QSOX1O00391 747 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 SCAMP1O15126 338 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 TGFB1P01137 390 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 KLKB1P03952 638 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 ENGP17813 658 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 PREPP48147 710 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 DEFA1P59665 94 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 DEFA3P59666 94 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 COPZ1P61923 177 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 DSC1Q08554 894 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 CD47Q08722 323 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 LRIT3Q3SXY7 679 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 TMC5Q6UXY8 1006 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 GDPD4Q6W3E5 623 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 CYHR1Q6ZMK1 362 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
RNF40-204ENST00000563683 ZNF614Q8N883 585 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 MCFD2Q8NI22 146 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 COL26A1Q96A83 441 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
RNF40-204ENST00000563683 MARCH7Q9H992 704 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 NTN4Q9HB63 628 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 IL26Q9NPH9 171 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 VPS29Q9UBQ0 182 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 USP22Q9UPT9 525 aa10.15□□□□□ -0.78
RNF40-204ENST00000563683 SLC9A3R1O14745 358 aaPredicted RBP10.15□□□□□ -0.79
RNF40-204ENST00000563683 EBLN1P0CF75 366 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 BMP1P13497 986 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 ATP1B2P14415 290 aaPredicted RBP10.15□□□□□ -0.79
RNF40-204ENST00000563683 PPP2R1BP30154 601 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 CLCN4P51793 760 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 TRAF3Q13114 568 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 SELPLGQ14242 412 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 ADPRMQ3LIE5 342 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 GTDC1Q4AE62 458 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 ATP13A5Q4VNC0 1218 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 NCEH1Q6PIU2 408 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 GALNT10Q86SR1 603 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 DYNC2LI1Q8TCX1 351 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 CXorf40AQ8TE69 158 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 TIFAQ96CG3 184 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 DUSP26Q9BV47 211 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 CEP44Q9C0F1 390 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 TRIM45Q9H8W5 580 aaPredicted RBP10.15□□□□□ -0.79
RNF40-204ENST00000563683 GIMAP4Q9NUV9 329 aa10.15□□□□□ -0.79
RNF40-204ENST00000563683 H2AFY2Q9P0M6 372 aaPredicted RBP10.15□□□□□ -0.79
RNF40-204ENST00000563683 LOC100130705A0A1B0GUX0 176 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 B4GALT3O60512 393 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 HTR1AP08908 422 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 BCKDHAP12694 445 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 BPIP17213 487 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 ALOX12P18054 663 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 PCMT1P22061 227 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 MANFP55145 182 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 IFITM2Q01629 132 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 EMX1Q04741 257 aaPredicted RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 RCAN2Q14206 197 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CES5AQ6NT32 575 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 TRIM40Q6P9F5 258 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CASP12Q6UXS9 341 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CYP4Z1Q86W10 505 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 OR8H2Q8N162 312 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CLIP4Q8N3C7 705 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 C1orf52Q8N6N3 182 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 ZNF557Q8N988 423 aaPredicted RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 TTC29Q8NA56 475 aaPredicted RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 GPR150Q8NGU9 434 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SORCS1Q8WY21 1168 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 SGCDQ92629 289 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 OSBPL10Q9BXB5 764 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 REXO4Q9GZR2 422 aaKnown RBP10.14□□□□□ -0.79
RNF40-204ENST00000563683 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 WNT6Q9Y6F9 365 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 NUMA1Q14980 2115 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 CCNKO75909 580 aa10.14□□□□□ -0.79
RNF40-204ENST00000563683 HRH2P25021 359 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms