RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PAK4O96013 591 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 HSD3B1P14060 373 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 PRPS1L1P21108 318 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 HSD3B2P26439 372 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 KIR3DL1P43629 444 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 CCR3P51677 355 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 POLE2P56282 527 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 WNT3P56703 355 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 SLC14A1Q13336 389 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 PPP4R4Q6NUP7 873 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 UNC5DQ6UXZ4 953 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 NUDT18Q6ZVK8 323 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 CENPNQ96H22 339 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-203ENST00000563226 RMND5AQ9H871 391 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 ITM2CQ9NQX7 267 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 OAZ3Q9UMX2 235 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 ERVK-11Q9UQG0 969 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 BTBD3Q9Y2F9 522 aa18.45■□□□□ 0.54
SMPD3-203ENST00000563226 YY2O15391 372 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 C1GALT1C1LP0DN25 315 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 GZMMP51124 257 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 RNF220Q5VTB9 566 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 ATG9BQ674R7 924 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 ZNF551Q7Z340 670 aaPredicted RBP18.44■□□□□ 0.54
SMPD3-203ENST00000563226 WDR34Q96EX3 536 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 RNF145Q96MT1 663 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 CHID1Q9BWS9 393 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 TEX101Q9BY14 249 aa18.44■□□□□ 0.54
SMPD3-203ENST00000563226 CCDC177Q9NQR7 707 aaPredicted RBP18.44■□□□□ 0.54
SMPD3-203ENST00000563226 TDRKHQ9Y2W6 561 aaKnown RBP18.44■□□□□ 0.54
SMPD3-203ENST00000563226 ELOVL7A1L3X0 281 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 PIPSLA2A3N6 862 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 DLGAP1O14490 977 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 RFXANKO14593 260 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 ACOX3O15254 700 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 SCN2BO60939 215 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 FUCA1P04066 466 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 CDH1P12830 882 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 COX7A2P14406 83 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 MYBPC1Q00872 1141 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 ZNF776Q68DI1 518 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 CALHM3Q86XJ0 350 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 CHERPQ8IWX8 916 aaKnown RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 TBC1D21Q8IYX1 336 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 TMEM132CQ8N3T6 1108 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 OXR1Q8N573 874 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 TP53I13Q8NBR0 393 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 ZNF740Q8NDX6 193 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 CHTF18Q8WVB6 975 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 SLC5A11Q8WWX8 675 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 TFGQ92734 400 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 OSBPL6Q9BZF3 934 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 PDP2Q9P2J9 529 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 F5P12259 2224 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 MYOCOSA0A1B0GUC4 107 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 EME2A4GXA9 379 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 GSTA4O15217 222 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 FCGR1AP12314 374 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 EFNA1P20827 205 aaPredicted RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 RPL10P27635 214 aaKnown RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 ATP6AP1Q15904 470 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 NKG7Q16617 165 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 HKDC1Q2TB90 917 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 TMEM196Q5HYL7 178 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 INTS11Q5TA45 600 aaKnown RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 THEMIS2Q5TEJ8 643 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 FOXB2Q5VYV0 432 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 DUS1LQ6P1R4 473 aaKnown RBP18.43■□□□□ 0.54
SMPD3-203ENST00000563226 ENPP6Q6UWR7 440 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 CLECL1Q8IZS7 167 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 DNAJB8Q8NHS0 232 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 FBXO30Q8TB52 745 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 NELL1Q92832 810 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 GBP5Q96PP8 586 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 SH3GL1Q99961 368 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 WDR26Q9H7D7 661 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 GORASP2Q9H8Y8 452 aa18.43■□□□□ 0.54
SMPD3-203ENST00000563226 CXCR6O00574 342 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 ANXA4P09525 319 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-203ENST00000563226 LAMP1P11279 417 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 TNFRSF4P43489 277 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 RPA4Q13156 261 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 METRNLQ641Q3 311 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 NXPE4Q6UWF7 544 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 DCUN1D3Q8IWE4 304 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 LAS2Q8IYD9 372 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 MICU2Q8IYU8 434 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 GANCQ8TET4 914 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 ACAT2Q9BWD1 397 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 FBXL12Q9NXK8 326 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 ADGRE2Q9UHX3 823 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 FAM220BPB1ANY3 271 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 SAP18O00422 153 aaKnown RBP18.42■□□□□ 0.54
SMPD3-203ENST00000563226 PLOD2O00469 737 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 LATO43561 262 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 PRMT3O60678 531 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 MYCLP1P12525 358 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-203ENST00000563226 COL9A1P20849 921 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 AGERQ15109 404 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 NHSL2Q5HYW2 709 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms