RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PLCD4Q9BRC7 762 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 DPH7Q9BTV6 452 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 ACAT2Q9BWD1 397 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 TRIM54Q9BYV2 358 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 ULBP3Q9BZM4 244 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 PCBD2Q9H0N5 130 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 ATG10Q9H0Y0 220 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 CCDC177Q9NQR7 707 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-204ENST00000563130 SNX15Q9NRS6 342 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 EURLQ9NYK6 297 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 ANKMY1Q9P2S6 941 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 CTNNAL1Q9UBT7 734 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 PLCL2Q9UPR0 1127 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 ACOT9Q9Y305 439 aa5.94□□□□□ -1.46
CNOT1-204ENST00000563130 PKD1L2Q7Z442 2459 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 TEX51A0A1B0GUA7 166 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 EXOC1LA0A1B0GW35 172 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 CCDC189A1A4V9 331 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 TMEM150CB9EJG8 249 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 KLK10O43240 276 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 WIPF1O43516 503 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 RAD1O60671 282 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 SRPX2O60687 465 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 CPNE3O75131 537 aaKnown RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 SCRG1O75711 98 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ANXA5P08758 320 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 NPPBP16860 134 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 CNTFP26441 200 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 CMPK1P30085 196 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 RPA3P35244 121 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 RORAP35398 523 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 GGT5P36269 586 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 MSH2P43246 934 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 HNMTP50135 292 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ITGA1P56199 1179 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ABHD18Q0P651 414 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 NAE1Q13564 534 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 CSHL1Q14406 222 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 OR4D1Q15615 310 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 UAP1Q16222 522 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 DEFB110Q30KQ9 67 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ZC3H12BQ5HYM0 836 aaKnown RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 PRAMEF17Q5VTA0 474 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 PRAMEF13Q5VWM6 474 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ZNF385CQ66K41 422 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 LCTLQ6UWM7 567 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 LRRC69Q6ZNQ3 347 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 PAQR7Q86WK9 346 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 KLHDC8AQ8IYD2 350 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ESX1Q8N693 406 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 UHMK1Q8TAS1 419 aaKnown RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ATL1Q8WXF7 558 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 RHBDF1Q96CC6 855 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ZNF837Q96EG3 531 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 GPR78Q96P69 363 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 ATOH8Q96SQ7 321 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 UNKQ9C0B0 810 aaKnown RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 TSPAN10Q9H1Z9 355 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 SYNPO2LQ9H987 977 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 FANCEQ9HB96 536 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 MRPS30Q9NP92 439 aaKnown RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 UTP6Q9NYH9 597 aaKnown RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 SERTAD3Q9UJW9 196 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 KMT2BQ9UMN6 2715 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-204ENST00000563130 PTPRQQ9UMZ3 2332 aa5.93□□□□□ -1.46
CNOT1-204ENST00000563130 SPTBP11277 2137 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 LOC400499M0QZD8 3231 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 A0A087X1B8 175 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 A0A096LPK6 155 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 TLDC2A0PJX2 215 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 SERTM1A2A2V5 107 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 FITM1A5D6W6 292 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 E7EQ34 232 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 POC1B-GALNT4F8VUJ3 575 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 OR2B3O76000 313 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 KRT38O76015 456 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 KLHL2O95198 593 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 CCNDBP1O95273 360 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 GUCA1CO95843 209 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 MT-ND3P03897 115 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 NTRK1P04629 796 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 LTA4HP09960 611 aaKnown RBP5.92□□□□□ -1.46
CNOT1-204ENST00000563130 MTHFD2P13995 350 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 HRH2P25021 359 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 TYK2P29597 1187 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 STAT5AP42229 794 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 SLC6A12P48065 614 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 SERPINB8P50452 374 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 PSMA6P60900 246 aaKnown RBP5.92□□□□□ -1.46
CNOT1-204ENST00000563130 GPS2Q13227 327 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 SRSF6Q13247 344 aaKnown RBP5.92□□□□□ -1.46
CNOT1-204ENST00000563130 ERCC6LQ2NKX8 1250 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 PTCHD3Q3KNS1 767 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 CAPN13Q6MZZ7 669 aaPredicted RBP5.92□□□□□ -1.46
CNOT1-204ENST00000563130 RHBDD2Q6NTF9 364 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 TLDC1Q6P9B6 456 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 C6orf15Q6UXA7 325 aaPredicted RBP5.92□□□□□ -1.46
CNOT1-204ENST00000563130 TIFABQ6ZNK6 161 aa5.92□□□□□ -1.46
CNOT1-204ENST00000563130 RAPH1Q70E73 1250 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms