RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 HRH2P25021 359 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 ARSFP54793 590 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 RAB10P61026 200 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 YBX1P67809 324 aaKnown RBP15.85■□□□□ 0.13
CDT1-202ENST00000562747 CDKL1Q00532 357 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 SLMAPQ14BN4 828 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 EFTUD2Q15029 972 aaKnown RBP eCLIP15.85■□□□□ 0.135e-7■■■■■ 40.8
CDT1-202ENST00000562747 PPP1R3AQ16821 1122 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 YOD1Q5VVQ6 348 aaPredicted RBP15.85■□□□□ 0.13
CDT1-202ENST00000562747 PRAMEF13Q5VWM6 474 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 ZNF385CQ66K41 422 aaPredicted RBP15.85■□□□□ 0.13
CDT1-202ENST00000562747 ZNF425Q6IV72 752 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 FAM199XQ6PEV8 388 aaPredicted RBP15.85■□□□□ 0.13
CDT1-202ENST00000562747 ADAMTSL2Q86TH1 951 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 FAM26EQ8N5C1 309 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 ZNF655Q8N720 491 aaPredicted RBP15.85■□□□□ 0.13
CDT1-202ENST00000562747 FBXL8Q96CD0 374 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 ZFYVE21Q9BQ24 234 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 SELENOSQ9BQE4 189 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 NDC1Q9BTX1 674 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 SGPP1Q9BX95 441 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 ATG10Q9H0Y0 220 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 ABCF3Q9NUQ8 709 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 CTNNAL1Q9UBT7 734 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 IKZF3Q9UKT9 509 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 SNX7Q9UNH6 387 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 SPTAN1Q13813 2472 aaKnown RBP15.85■□□□□ 0.13
CDT1-202ENST00000562747 SPTBP11277 2137 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 A0A0J9YVX5 310 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 BLACEA4D250 179 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 NPEPPSL1A6NEC2 478 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 CDC7O00311 574 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 PHGDHO43175 533 aaKnown RBP15.84■□□□□ 0.13
CDT1-202ENST00000562747 RECKO95980 971 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 CTSBP07858 339 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 RAB40ALP0C0E4 278 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 RHOXF2BP0C7M4 288 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
CDT1-202ENST00000562747 GCGRP47871 477 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 MLLT10P55197 1068 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 RPS15P62841 145 aaKnown RBP15.84■□□□□ 0.13
CDT1-202ENST00000562747 KLRB1Q12918 225 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 NAE1Q13564 534 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 GRM7Q14831 915 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 HIST2H2BCQ6DN03 193 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 CAPN13Q6MZZ7 669 aaPredicted RBP15.84■□□□□ 0.13
CDT1-202ENST00000562747 FBXO42Q6P3S6 717 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 LCTLQ6UWM7 567 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 PAQR7Q86WK9 346 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 OR56A3Q8NH54 315 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 C17orf62Q9BQA9 187 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 RHOXF2Q9BQY4 288 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 CHST8Q9H2A9 424 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 TXLNGQ9NUQ3 528 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 NFU1Q9UMS0 254 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 OARD1Q9Y530 152 aa15.84■□□□□ 0.13
CDT1-202ENST00000562747 FITM1A5D6W6 292 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 NRP2O60462 931 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 KATNA1O75449 491 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 ACSL3O95573 720 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 GUCA1CO95843 209 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 PDGFAP04085 211 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 ANXA5P08758 320 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 CCDC166P0CW27 439 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 PTPN4P29074 926 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 CRABP2P29373 138 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 CD97P48960 835 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 VSX2P58304 361 aaPredicted RBP15.83■□□□□ 0.12
CDT1-202ENST00000562747 ATP6V0D1P61421 351 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 TSNQ15631 228 aaKnown RBP15.83■□□□□ 0.12
CDT1-202ENST00000562747 FRA10AC1Q70Z53 315 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 CCDC91Q7Z6B0 441 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 TTC29Q8NA56 475 aaPredicted RBP15.83■□□□□ 0.12
CDT1-202ENST00000562747 UBXN10Q96LJ8 280 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 GBP5Q96PP8 586 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 HAUS8Q9BT25 410 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 NLNQ9BYT8 704 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 TMEM184CQ9NVA4 438 aa15.83■□□□□ 0.12
CDT1-202ENST00000562747 FARSAQ9Y285 508 aaKnown RBP15.83■□□□□ 0.12
CDT1-202ENST00000562747 TNRC6AQ8NDV7 1962 aaKnown RBP15.83■□□□□ 0.12
CDT1-202ENST00000562747 ZNF500O60304 480 aaPredicted RBP15.82■□□□□ 0.12
CDT1-202ENST00000562747 CREG1O75629 220 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 CD1DP15813 335 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 UQCRFS1P47985 274 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 HNMTP50135 292 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 DCDP81605 110 aaKnown RBP15.82■□□□□ 0.12
CDT1-202ENST00000562747 ERV3-1Q14264 604 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 ZXDCQ2QGD7 858 aaPredicted RBP15.82■□□□□ 0.12
CDT1-202ENST00000562747 FAM214AQ32MH5 1076 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 PTCHD3Q3KNS1 767 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 WASHC2DQ5SRD0 308 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 UBAP2Q5T6F2 1119 aaKnown RBP15.82■□□□□ 0.12
CDT1-202ENST00000562747 FRMPD2BQ6IN97 320 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 LCN10Q6JVE6 187 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 FAM198BQ6UWH4 519 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 RAPH1Q70E73 1250 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 ADCK2Q7Z695 626 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 SYVN1Q86TM6 617 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 C17orf64Q86WR6 236 aa15.82■□□□□ 0.12
CDT1-202ENST00000562747 EIF1ADQ8N9N8 165 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms