RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 KIF5AQ12840 1032 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 GAGE5Q13069 117 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 GAGE6Q13070 117 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 PTGISQ16647 500 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 DUOXA1Q1HG43 343 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 FIGLAQ6QHK4 219 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 DENND5BQ6ZUT9 1274 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 RPAINQ86UA6 219 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 EXOC3L1Q86VI1 746 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 TMEM219Q86XT9 240 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 DCP1BQ8IZD4 617 aaKnown RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 IQUBQ8NA54 791 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 CAMKVQ8NCB2 501 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 CLEC18CQ8NCF0 446 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 SPATA22Q8NHS9 363 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 SDR42E1Q8WUS8 393 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 SPDL1Q96EA4 605 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 LINGO1Q96FE5 620 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 LMLNQ96KR4 655 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 TTC14Q96N46 770 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 PCYT2Q99447 389 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 CDCA3Q99618 268 aaPredicted RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 ADPGKQ9BRR6 497 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 LMF2Q9BU23 707 aaKnown RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 PANK2Q9BZ23 570 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 IL25Q9H293 177 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 DPAGT1Q9H3H5 408 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 RAVER2Q9HCJ3 691 aaKnown RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 C5AR2Q9P296 337 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 KLHL9Q9P2J3 617 aa3.53□□□□□ -1.84
HERC1-215ENST00000561436 NOL7Q9UMY1 257 aaKnown RBP3.53□□□□□ -1.84
HERC1-215ENST00000561436 UMODL1Q5DID0 1318 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 PRSS51A0A1B0GVH4 220 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 EPOPA6NHQ4 379 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 CCER2I3L3R5 266 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ACOT8O14734 319 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 STAM2O75886 525 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ZBTB11O95625 1053 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 GH1P01241 217 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RPN1P04843 607 aaKnown RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 TFAP2AP05549 437 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 CDH1P12830 882 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 MYOGP15173 224 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ITGA2P17301 1181 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 CBLP22681 906 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 PTAFRP25105 342 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 CCR10P46092 362 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 FMO5P49326 533 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 HOXA1P49639 335 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 DVL1P1P54792 670 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 PITX1P78337 314 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 BEX3Q00994 111 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 CNTN2Q02246 1040 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 SIGLEC14Q08ET2 396 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 TROAPQ12815 778 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 COASYQ13057 564 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ZBTB17Q13105 803 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RAB6CQ53S08 254 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 PDSS1Q5T2R2 415 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RNASEH2BQ5TBB1 312 aaKnown RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 ZNF324BQ6AW86 544 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 FAM171BQ6P995 826 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 IL27RAQ6UWB1 636 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ZBTB49Q6ZSB9 765 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 TMPRSS11FQ6ZWK6 438 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 TUBA1AQ71U36 451 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 GALNTL5Q7Z4T8 443 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 DEFB128Q7Z7B8 93 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 PTOV1Q86YD1 416 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 GPALPP1Q8IXQ4 340 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 UBALD2Q8IYN6 164 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 SMRP1Q8NCR6 262 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 OR2AJ1Q8NGZ0 328 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 PPTC7Q8NI37 304 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 BBS10Q8TAM1 723 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 LNX1Q8TBB1 728 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 CCDC107Q8WV48 283 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 NUDCD2Q8WVJ2 157 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RSPH1Q8WYR4 309 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ROBO4Q8WZ75 1007 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 SEPT8Q92599 483 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 P2RX5Q93086 422 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 TOP1MTQ969P6 601 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 FAM162AQ96A26 154 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 DYNLL2Q96FJ2 89 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RMDN2Q96LZ7 410 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ZNF582Q96NG8 517 aaPredicted RBP3.52□□□□□ -1.85
HERC1-215ENST00000561436 IL17FQ96PD4 163 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 TUBA1CQ9BQE3 449 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 LRRC1Q9BTT6 524 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 GPR88Q9GZN0 384 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RAB6CQ9H0N0 254 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 TBC1D17Q9HA65 648 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 EBF2Q9HAK2 575 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 ABCF3Q9NUQ8 709 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 NPAP1Q9NZP6 1156 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 RASAL2Q9UJF2 1139 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 CCPG1Q9ULG6 757 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 PCDHGB1Q9Y5G3 927 aa3.52□□□□□ -1.85
HERC1-215ENST00000561436 SPIN1Q9Y657 262 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms