RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 HIST1H2AJQ99878 128 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ZFYVE21Q9BQ24 234 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 TMEM79Q9BSE2 394 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 H2AFJQ9BTM1 129 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ENAMQ9NRM1 1142 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 SNX15Q9NRS6 342 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ZNF358Q9NW07 568 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 SCN2AQ99250 2005 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 POC1B-GALNT4F8VUJ3 575 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 RIPK2O43353 540 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 PRAMEF4O60810 478 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 MT-ND3P03897 115 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 EIF2S1P05198 315 aaKnown RBP13.28□□□□□ -0.28
TPM1-230ENST00000561266 PHBP35232 272 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 PMS2P54278 862 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 ABATP80404 500 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 IL10RAQ13651 578 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 TGFBIQ15582 683 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
TPM1-230ENST00000561266 PRAMEF9Q5VWM5 478 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 TLDC1Q6P9B6 456 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 LCTLQ6UWM7 567 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 TTLL10Q6ZVT0 673 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 COX15Q7KZN9 410 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 VN1R4Q7Z5H5 301 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
TPM1-230ENST00000561266 ENDOVQ8N8Q3 282 aaKnown RBP13.28□□□□□ -0.28
TPM1-230ENST00000561266 EXTL1Q92935 676 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 RHBDF1Q96CC6 855 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 DHRS4Q9BTZ2 278 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 ACTL8Q9H568 366 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 TMEM184CQ9NVA4 438 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 IRAK4Q9NWZ3 460 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 ANKMY1Q9P2S6 941 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 SNX7Q9UNH6 387 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 PCDHGA6Q9Y5G7 932 aa13.28□□□□□ -0.28
TPM1-230ENST00000561266 PIEZO2Q9H5I5 2752 aa13.27□□□□□ -0.28
TPM1-230ENST00000561266 SRPX2O60687 465 aaPredicted RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 CREG1O75629 220 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 KLK3P07288 261 aaPredicted RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 TFEBP19484 476 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 PTPN4P29074 926 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 BCL6P41182 706 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 MAGEA12P43365 314 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 OR1D4P47884 311 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 SLC6A12P48065 614 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 CDKL1Q00532 357 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 CDC20Q12834 499 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 ERV3-1Q14264 604 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 SLC29A2Q14542 456 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 TBR1Q16650 682 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 CAPN13Q6MZZ7 669 aaPredicted RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 C16orf46Q6P387 395 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 CEP128Q6ZU80 1094 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 RAPH1Q70E73 1250 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 ADCK2Q7Z695 626 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 ADAMTSL2Q86TH1 951 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 THOC6Q86W42 341 aaKnown RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 EXD3Q8N9H8 876 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 OR4K1Q8NGD4 311 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 KIAA1191Q96A73 305 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 KIAA1143Q96AT1 154 aaPredicted RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 ATOH8Q96SQ7 321 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 TRIM54Q9BYV2 358 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 SEMA4CQ9C0C4 833 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 ALG9Q9H6U8 611 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 CUTCQ9NTM9 273 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.27□□□□□ -0.29
TPM1-230ENST00000561266 RUVBL1Q9Y265 456 aaKnown RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 SLC22A14Q9Y267 594 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 FARSAQ9Y285 508 aaKnown RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 AP1M2Q9Y6Q5 423 aa13.27□□□□□ -0.29
TPM1-230ENST00000561266 V9GYY5 206 aaPredicted RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 SMG1Q96Q15 3661 aaKnown RBP13.27□□□□□ -0.29
TPM1-230ENST00000561266 A0A087WUV0 522 aaPredicted RBP13.26□□□□□ -0.29
TPM1-230ENST00000561266 A0A096LPK6 155 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 HYKKA2RU49 373 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 ZNF891A8MT65 544 aaPredicted RBP13.26□□□□□ -0.29
TPM1-230ENST00000561266 FOXO6A8MYZ6 492 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 KLF7O75840 302 aaPredicted RBP13.26□□□□□ -0.29
TPM1-230ENST00000561266 CCNDBP1O95273 360 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 ANXA5P08758 320 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 ABHD2P08910 425 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 LTA4HP09960 611 aaKnown RBP13.26□□□□□ -0.29
TPM1-230ENST00000561266 MTHFD2P13995 350 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 ALAS2P22557 587 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 CRABP2P29373 138 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 GLRBP48167 497 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 TRMT10CQ7L0Y3 403 aaKnown RBP13.26□□□□□ -0.29
TPM1-230ENST00000561266 C17orf64Q86WR6 236 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 GPSM1Q86YR5 675 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 ABHD11Q8NFV4 315 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 EXT2Q93063 718 aa13.26□□□□□ -0.29
TPM1-230ENST00000561266 ISL2Q96A47 359 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms