RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 C3orf18Q9UK00 162 aa19.66■□□□□ 0.74
ETFA-213ENST00000560309 MED16Q9Y2X0 877 aa19.66■□□□□ 0.74
ETFA-213ENST00000560309 MDC1Q14676 2089 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 KRT87PA6NCN2 255 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 CBX6O95503 412 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 SYF2O95926 243 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 SLC26A3P40879 764 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 GLRBP48167 497 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 ELOAQ14241 798 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 HSP90AA5PQ58FG0 334 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 THEMIS2Q5TEJ8 643 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 ISLR2Q6UXK2 745 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 UBE2R2Q712K3 238 aaPredicted RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 NDUFAF7Q7L592 441 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 KCNMB4Q86W47 210 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 PARP9Q8IXQ6 854 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 METTL27Q8N6F8 245 aaPredicted RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 THAP11Q96EK4 314 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 THOC3Q96J01 351 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 C10orf90Q96M02 699 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 SLC30A3Q99726 388 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 AARSD1Q9BTE6 412 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 ASF1BQ9NVP2 202 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 TRMT6Q9UJA5 497 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 RUVBL1Q9Y265 456 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 PCDHGA10Q9Y5H3 936 aa19.65■□□□□ 0.74
ETFA-213ENST00000560309 SPTAN1Q13813 2472 aaKnown RBP19.65■□□□□ 0.74
ETFA-213ENST00000560309 KCNE1BA0A087WTH5 132 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 IGKV1-8A0A0C4DH67 115 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 A0A1W2PQ72 361 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 CYSRT1A8MQ03 144 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 SLC16A5O15375 505 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 HAUS5O94927 633 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 C8GP07360 202 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 CYC1P08574 325 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 CCND1P24385 295 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 TSFMP43897 325 aaKnown RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 AVPR1BP47901 424 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 EMP2P54851 167 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 YBX1P67809 324 aaKnown RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 TLR1Q15399 786 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 PRR30Q53SZ7 412 aaPredicted RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 RNASEH2BQ5TBB1 312 aaKnown RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 SHISA6Q6ZSJ9 500 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 KIAA0408Q6ZU52 694 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 KBTBD2Q8IY47 623 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 LRRC56Q8IYG6 542 aaPredicted RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 C2CD4AQ8NCU7 369 aaPredicted RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 GIMAP7Q8NHV1 300 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 PRR7Q8TB68 274 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 CD200R1Q8TD46 325 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 SLCO2A1Q92959 643 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 TRIM56Q9BRZ2 755 aaKnown RBP19.64■□□□□ 0.73
ETFA-213ENST00000560309 DRC3Q9H069 523 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 TAS2R13Q9NYV9 303 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 TRPC4Q9UBN4 977 aa19.64■□□□□ 0.73
ETFA-213ENST00000560309 MED26O95402 600 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 ICAM2P13598 275 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 SP140Q13342 867 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 CUL1Q13616 776 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 EIF2S3LQ2VIR3 472 aaKnown RBP19.63■□□□□ 0.73
ETFA-213ENST00000560309 VWA2Q5GFL6 755 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 SPANXN3Q5MJ09 141 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 ADCK2Q7Z695 626 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 GALNT7Q86SF2 657 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 CUZD1Q86UP6 607 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 C19orf60Q96EN9 201 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 MMABQ96EY8 250 aaPredicted RBP19.63■□□□□ 0.73
ETFA-213ENST00000560309 YIPF2Q9BWQ6 316 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 ZBTB20Q9HC78 741 aaPredicted RBP19.63■□□□□ 0.73
ETFA-213ENST00000560309 CCDC177Q9NQR7 707 aaPredicted RBP19.63■□□□□ 0.73
ETFA-213ENST00000560309 IARS2Q9NSE4 1012 aaKnown RBP19.63■□□□□ 0.73
ETFA-213ENST00000560309 PCYOX1Q9UHG3 505 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 SNX12Q9UMY4 172 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 ICE1Q9Y2F5 2266 aa19.63■□□□□ 0.73
ETFA-213ENST00000560309 COL12A1Q99715 3063 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 NSG1A0A0A6YYJ2 146 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 ANKUB1A6NFN9 424 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 IDSB3KWA1 339 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 H0YIG0 161 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 NRP2O60462 931 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 HIST1H2AGP0C0S8 130 aaPredicted RBP19.62■□□□□ 0.73
ETFA-213ENST00000560309 TCP1P17987 556 aaKnown RBP19.62■□□□□ 0.73
ETFA-213ENST00000560309 HIST1H2ADP20671 130 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 IMPA1P29218 277 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 RPS15AP62244 130 aaKnown RBP19.62■□□□□ 0.73
ETFA-213ENST00000560309 MFAP5Q13361 173 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 ZNF169Q14929 603 aaPredicted RBP19.62■□□□□ 0.73
ETFA-213ENST00000560309 RPUSD3Q6P087 351 aaKnown RBP19.62■□□□□ 0.73
ETFA-213ENST00000560309 RIPOR1Q6ZS17 1223 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 TMEM151BQ8IW70 566 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 CPNE9Q8IYJ1 553 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 SLC35F6Q8N357 371 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 PPFIBP2Q8ND30 876 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 HIST1H2AHQ96KK5 128 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 RUNDC3BQ96NL0 473 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 HIST1H2AJQ99878 128 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 H2AFJQ9BTM1 129 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 PARVBQ9HBI1 364 aa19.62■□□□□ 0.73
ETFA-213ENST00000560309 PRRC2CQ9Y520 2896 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms