RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ZFYVE21Q9BQ24 234 aa19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 SELENOSQ9BQE4 189 aa19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 AKIRIN1Q9H9L7 192 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 STARD5Q9NSY2 213 aa19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 PCMTD2Q9NV79 361 aa19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 WWOXQ9NZC7 414 aa19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 SSUH2Q9Y2M2 353 aa19.43■□□□□ 0.7
TSPAN3-207ENST00000559494 PTPRQQ9UMZ3 2332 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 SYCE1LA8MT33 242 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 GOLGA8RI6L899 631 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 KLK10O43240 276 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 SRPX2O60687 465 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 WDR47O94967 919 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 MT-ND3P03897 115 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 S100BP04271 92 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 RBP1P09455 135 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 PYGBP11216 843 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 ITPKBP27987 946 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 AGTR2P50052 363 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 VSX2P58304 361 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 COL9A2Q14055 689 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 TSNAXIP1Q2TAA8 658 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 CATSPEREQ5SY80 951 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 SH2D5Q6ZV89 423 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 CACNA2D3Q8IZS8 1091 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 NLGN4XQ8N0W4 816 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 CNPY4Q8N129 248 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 ZNF655Q8N720 491 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 NLGN4YQ8NFZ3 816 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 OR4K1Q8NGD4 311 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 ACMSDQ8TDX5 336 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 SCYL1Q96KG9 808 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 TSNARE1Q96NA8 513 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 OR2A5Q96R48 311 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 ENAMQ9NRM1 1142 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 ASB1Q9Y576 335 aa19.42■□□□□ 0.7
TSPAN3-207ENST00000559494 LAMA5O15230 3695 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 DSPP15924 2871 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 H0YGG7 62 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 KLK8O60259 260 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 CDH16O75309 829 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 STK16O75716 305 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 EZRP15311 586 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 GCGRP47871 477 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 ARF3P61204 181 aaPredicted RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 GPS2Q13227 327 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 SRSF6Q13247 344 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 MAP7Q14244 749 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 WASHC2DQ5SRD0 308 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 TLDC1Q6P9B6 456 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 TMEM151AQ8N4L1 468 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 SLC5A11Q8WWX8 675 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 CD244Q9BZW8 370 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 ROPN1BQ9BZX4 212 aaPredicted RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 CNOT10Q9H9A5 744 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 ACTR5Q9H9F9 607 aaPredicted RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 ROPN1Q9HAT0 212 aaPredicted RBP19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 TMEM216Q9P0N5 145 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 PLAAQ9Y263 795 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 DYRK1BQ9Y463 629 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 KCNE2Q9Y6J6 123 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 AP1M2Q9Y6Q5 423 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 ZFHX4Q86UP3 3567 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 FER1L5A0AVI2 2057 aa19.41■□□□□ 0.7
TSPAN3-207ENST00000559494 ZSCAN9O15535 394 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 LCMT2O60294 686 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 CPNE3O75131 537 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 IPO13O94829 963 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 SBK3P0C264 359 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 CCR8P51685 355 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 IFFO1Q0D2I5 559 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 TCTE1Q5JU00 501 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 NXPE4Q6UWF7 544 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 LRRC69Q6ZNQ3 347 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 ESX1Q8N693 406 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 MRPL57Q9BQC6 102 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 DNAJC11Q9NVH1 559 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 IRAK4Q9NWZ3 460 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 XPR1Q9UBH6 696 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 PADI1Q9ULC6 663 aa19.4■□□□□ 0.7
TSPAN3-207ENST00000559494 PKD1L2Q7Z442 2459 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 CFAP47Q6ZTR5 3102 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 LOC101059948A0A1B0GTJ6 334 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 FEZF1A0PJY2 475 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 EFSO43281 561 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 PRAMEF4O60810 478 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 EIF2S1P05198 315 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 KRT15P19012 456 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 RORAP35398 523 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 MEF2AQ02078 507 aaPredicted RBP19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 TLE3Q04726 772 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 ABHD18Q0P651 414 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 CDC16Q13042 620 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 PFKFB4Q16877 469 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 PRAMEF9Q5VWM5 478 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 C16orf46Q6P387 395 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 SLCO4C1Q6ZQN7 724 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 VASH2Q86V25 355 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 IL22RA1Q8N6P7 574 aa19.39■□□□□ 0.69
TSPAN3-207ENST00000559494 ZNF740Q8NDX6 193 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms