RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HOMEZQ8IX15 550 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 RHBDD1Q8TEB9 315 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 THOC1Q96FV9 657 aaKnown RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 AHCYL2Q96HN2 611 aaKnown RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 SPNS1Q9H2V7 528 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 TMEM184CQ9NVA4 438 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 EVA1BQ9NVM1 165 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 SNX7Q9UNH6 387 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 KLK4Q9Y5K2 254 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 EP300Q09472 2414 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 A0A0J9YY10 115 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 H0YIV9 168 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 FFAR3O14843 346 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CAPN5O15484 640 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 GPR42O15529 346 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 DUX1O43812 170 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 LDOC1O95751 146 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 CD1CP29017 333 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 HMOX2P30519 316 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 LSSP48449 732 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CSNK1G2P78368 415 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 MEF2AQ02078 507 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 TCHHL1Q5QJ38 904 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 ZNF425Q6IV72 752 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 RFWD2Q8NHY2 731 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 TWIST2Q8WVJ9 160 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 NCSTNQ92542 709 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CNDP2Q96KP4 475 aaKnown RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 PPM1MQ96MI6 270 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 ELAC2Q9BQ52 826 aaKnown RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 AIF1LQ9BQI0 150 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 PLCD4Q9BRC7 762 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 TUBB1Q9H4B7 451 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 SNX6Q9UNH7 406 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 KLHL20Q9Y2M5 609 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 ASCC3Q8N3C0 2202 aaKnown RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 ASXL3Q9C0F0 2248 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 C4orf47A7E2U8 309 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 MANBAO00462 879 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 SH3BP5O60239 455 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CHEK2O96017 543 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 KRT6AP02538 564 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 KRT6BP04259 564 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 JUNP05412 331 aaKnown RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 CKMT2P17540 419 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CXCR2P25025 360 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 KRT6CP48668 564 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 PPM1FP49593 454 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 REEP5Q00765 189 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CFHR1Q03591 330 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 SQSTM1Q13501 440 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 PDCD2Q16342 344 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 HIST2H2ACQ16777 129 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 AMZ1Q400G9 498 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 HIST2H2AA3Q6FI13 130 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 IRGCQ6NXR0 463 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 MED27Q6P2C8 311 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 NAXDQ8IW45 347 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 LAS2Q8IYD9 372 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 KRT78Q8N1N4 520 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 ZNF740Q8NDX6 193 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 WDR20Q8TBZ3 569 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 IFI44Q8TCB0 444 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 ZUFSPQ96AP4 578 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 CCDC3Q9BQI4 270 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 SIKE1Q9BRV8 207 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 PITHD1Q9GZP4 211 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 KCNK13Q9HB14 408 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 KLHL14Q9P2G3 628 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 ZNF490Q9ULM2 529 aaPredicted RBP17.37■□□□□ 0.37
CLPX-203ENST00000558958 PCDHGA11Q9Y5H2 935 aa17.37■□□□□ 0.37
CLPX-203ENST00000558958 COL5A1P20908 1838 aaPredicted RBP17.36■□□□□ 0.37
CLPX-203ENST00000558958 RP1P56715 2156 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 SNRNP200O75643 2136 aaKnown RBP17.36■□□□□ 0.37
CLPX-203ENST00000558958 OR2A25A4D2G3 310 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 GDF9O60383 454 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 SNX3O60493 162 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 ULK1O75385 1050 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 SKAP2O75563 359 aaPredicted RBP17.36■□□□□ 0.37
CLPX-203ENST00000558958 MAGP20916 626 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 HTR6P50406 440 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 AQP5P55064 265 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 INHBCP55103 352 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 GFERP55789 205 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 BTKQ06187 659 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 SF3A3Q12874 501 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLPX-203ENST00000558958 NAA25Q14CX7 972 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 FRG2Q64ET8 278 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 FIGLAQ6QHK4 219 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 WDR74Q6RFH5 385 aaPredicted RBP17.36■□□□□ 0.37
CLPX-203ENST00000558958 TMIGD1Q6UXZ0 262 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 RNF165Q6ZSG1 346 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 SPATA21Q7Z572 469 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 ADCK2Q7Z695 626 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 PIGWQ7Z7B1 504 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 PAQR7Q86WK9 346 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 OR7G3Q8NG95 312 aa17.36■□□□□ 0.37
CLPX-203ENST00000558958 USP7Q93009 1102 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms