RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CDH1P12830 882 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ITGAXP20702 1163 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 GCGRP47871 477 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 PMS2P54278 862 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 AP1S2P56377 157 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 CSNK1G2P78368 415 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 HKDC1Q2TB90 917 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 CATSPEREQ5SY80 951 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 MLIPQ5VWP3 458 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 CAPN13Q6MZZ7 669 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 RHBDD2Q6NTF9 364 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 TLDC1Q6P9B6 456 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 LCTLQ6UWM7 567 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 FRA10AC1Q70Z53 315 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ENDOVQ8N8Q3 282 aaKnown RBP13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ANKRD7Q92527 254 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 EXT2Q93063 718 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ZNF285Q96NJ3 590 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 GBP5Q96PP8 586 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 OR2A5Q96R48 311 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ZFYVE21Q9BQ24 234 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 NDC1Q9BTX1 674 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 TXLNGYQ9BZA5 131 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 SPNS1Q9H2V7 528 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 EPB41L4BQ9H329 900 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 ANKZF1Q9H8Y5 726 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 SLC22A11Q9NSA0 550 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 CUTCQ9NTM9 273 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 TMEM184CQ9NVA4 438 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 SLC22A14Q9Y267 594 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 AP1M2Q9Y6Q5 423 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 CCDC88CQ9P219 2028 aa13.22□□□□□ -0.29
TSPAN3-205ENST00000558745 A0A087WUV0 522 aaPredicted RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 CDC14CA4D256 554 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 P2RX6O15547 441 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 RIPK2O43353 540 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 SRPX2O60687 465 aaPredicted RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 CNOT3O75175 753 aaKnown RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 ANXA5P08758 320 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 GCAP28676 217 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 CRABP2P29373 138 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 MSH2P43246 934 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 OR1D4P47884 311 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 GLRBP48167 497 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 CSRP3P50461 194 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 SLC29A2Q14542 456 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 TGFBIQ15582 683 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 TBR1Q16650 682 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 FAM198BQ6UWH4 519 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 ISCA2Q86U28 154 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 THOC6Q86W42 341 aaKnown RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 GPSM1Q86YR5 675 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 SHISA5Q8N114 240 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 PLD6Q8N2A8 252 aaKnown RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 DCAKDQ8WVC6 231 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 TTC9Q92623 222 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 RHBDF1Q96CC6 855 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 TSNARE1Q96NA8 513 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 UBL7Q96S82 380 aaPredicted RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 VPS11Q9H270 941 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 ALG9Q9H6U8 611 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 TXLNGQ9NUQ3 528 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 ZNF358Q9NW07 568 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 ACOT9Q9Y305 439 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 MAU2Q9Y6X3 613 aa13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 MDC1Q14676 2089 aaKnown RBP13.21□□□□□ -0.29
TSPAN3-205ENST00000558745 A0A096LPK6 155 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 HYKKA2RU49 373 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 CYSRT1A8MQ03 144 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 CREG1O75629 220 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ALDOAP04075 364 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 INHBAP08476 426 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 HBQ1P09105 142 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 TFEBP19484 476 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 AGXTP21549 392 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 PTPN4P29074 926 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 TYK2P29597 1187 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ATP6V0D1P61421 351 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 DCDP81605 110 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 LY6DQ14210 128 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 GRM7Q14831 915 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 TCTE1Q5JU00 501 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ADAMTSL2Q86TH1 951 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 CENPLQ8N0S6 344 aaPredicted RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 TTC29Q8NA56 475 aaPredicted RBP13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ZNF740Q8NDX6 193 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 ATL1Q8WXF7 558 aa13.2□□□□□ -0.3
TSPAN3-205ENST00000558745 NEIL2Q969S2 332 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms