RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 SMYD1Q8NB12 490 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 GPR26Q8NDV2 337 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 OR4K2Q8NGD2 314 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 BLOC1S5Q8TDH9 187 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 LRRC8CQ8TDW0 803 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 CXorf40AQ8TE69 158 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 SLC44A1Q8WWI5 657 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 GAB3Q8WWW8 586 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 JADE3Q92613 823 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 NUS1Q96E22 293 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 ABHD17AQ96GS6 310 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 DNAJC1Q96KC8 554 aaKnown RBP3.97□□□□□ -1.77
ZEB1-212ENST00000558655 SMIM14Q96QK8 99 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 CYTH2Q99418 400 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 CCDC77Q9BR77 488 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 NTMT1Q9BV86 223 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 GPR63Q9BZJ6 419 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 BTBD1Q9H0C5 482 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 P2RY12Q9H244 342 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 FAM83DQ9H4H8 585 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 ACTR5Q9H9F9 607 aaPredicted RBP3.97□□□□□ -1.77
ZEB1-212ENST00000558655 POPDC3Q9HBV1 291 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 EHD3Q9NZN3 535 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 KLHL14Q9P2G3 628 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 TMPRSS11EQ9UL52 423 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 TMEM5Q9Y2B1 443 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 WDR37Q9Y2I8 494 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 ARL2BPQ9Y2Y0 163 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 PKP3Q9Y446 797 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 PCDHB11Q9Y5F2 797 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 ARL5AQ9Y689 179 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 R4GN57 208 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 CACNA1IQ9P0X4 2223 aa3.97□□□□□ -1.77
ZEB1-212ENST00000558655 SZT2Q5T011 3432 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 GLYATL1P3A0A0U1RQE8 302 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PMS2P1A4D2B8 440 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 TRIM49D1C9J1S8 452 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 F8W8V4 182 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ENTPD5O75356 428 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SRP72O76094 671 aaKnown RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 UBXN7O94888 489 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 FGF4P08620 206 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ACADMP11310 421 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ITGALP20701 1170 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 AKT1P31749 480 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SERPINB9P50453 376 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 CLCNKAP51800 687 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 UCNP55089 124 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PFN3P60673 137 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 NFATC2Q13469 925 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 LINC01559Q495D7 138 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 HSP90AA5PQ58FG0 334 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 LDLRAP1Q5SW96 308 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 NEPROQ6NW34 567 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PNCKQ6P2M8 343 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 CASC4Q6P4E1 433 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 KIAA1324Q6UXG2 1013 aaKnown RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 MACC1Q6ZN28 852 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 KCNMB4Q86W47 210 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 GATAD2AQ86YP4 633 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 CILP2Q8IUL8 1156 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 FBXW8Q8N3Y1 598 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 OXR1Q8N573 874 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 OR10H5Q8NGA6 315 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 OR13C4Q8NGS5 318 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 OR4L1Q8NH43 312 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ZNF483Q8TF39 744 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 MZB1Q8WU39 189 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 DCAKDQ8WVC6 231 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 HMGB4Q8WW32 186 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 LPGAT1Q92604 370 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 LINC00615Q96LM1 132 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PPP1R36Q96LQ0 422 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 MAGEB18Q96M61 343 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ZNF778Q96MU6 729 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PSMG3-AS1Q96PY0 264 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 HHIPQ96QV1 700 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 CPNE1Q99829 537 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ITPAQ9BY32 194 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SLC17A9Q9BYT1 436 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SLC6A17Q9H1V8 727 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 MS4A5Q9H3V2 200 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 STN1Q9H668 368 aaKnown RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 EPS8L2Q9H6S3 715 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 COPS7BQ9H9Q2 264 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 MID1IP1Q9NPA3 183 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SERINC1Q9NRX5 453 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 CATSPERZQ9NTU4 200 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PCMTD2Q9NV79 361 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SPATA6Q9NWH7 488 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 TMEM160Q9NX00 188 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 ZDHHC3Q9NYG2 299 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PSMC3IPQ9P2W1 217 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SLC2A6Q9UGQ3 507 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 KCTD3Q9Y597 815 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 PCDHB1Q9Y5F3 818 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SNX13Q9Y5W8 968 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-212ENST00000558655 A0A1W2PR77 199 aa3.96□□□□□ -1.78
ZEB1-212ENST00000558655 SLC9B1P1A6NJY1 282 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms