RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MLLT6P55198 1093 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TROQ12816 1431 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 DCAF12L1Q5VU92 463 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KIAA1614Q5VZ46 1190 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RPTNQ6XPR3 784 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 QSOX2Q6ZRP7 698 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 NUDT18Q6ZVK8 323 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 KCTD15Q96SI1 283 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 E5RJQ4 531 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 NUDT6P53370 316 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CRISP1P54107 249 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 SH3BP2P78314 561 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF155Q12901 538 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 BAK1Q16611 211 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 GXYLT1Q4G148 440 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RNF130Q86XS8 419 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 ANGPTL6Q8NI99 470 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 CNTNAP3Q9BZ76 1288 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 TXNL4BQ9NX01 149 aaKnown RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 MARCH2Q9P0N8 246 aa3.6□□□□□ -1.83
ATXN3-248ENST00000558190 RCOR3Q9P2K3 495 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-248ENST00000558190 H3BMQ9 156 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SLC9A3R1O14745 358 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 FDX1P10109 184 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 HLA-DMAP28067 261 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 FOXR2Q6PJQ5 311 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZFP82Q8N141 532 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 WDTC1Q8N5D0 677 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 OR7G3Q8NG95 312 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TSSK3Q96PN8 268 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 OR51I1Q9H343 314 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SMPD4Q9NXE4 827 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 MYPNQ86TC9 1320 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 FABP1P07148 127 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 KLHL36Q8N4N3 616 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TCEANCQ8N8B7 351 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TXNDC5Q8NBS9 432 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SLC45A3Q96JT2 553 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TSSK6Q9BXA6 273 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TRIM2Q9C040 744 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 HOXD1Q9GZZ0 328 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF226Q9NYT6 803 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CKLFQ9UBR5 152 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 BHMG1C9JSJ3 638 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 OR1I1O60431 355 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TUBG1P23258 451 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ADAM5Q6NVV9 412 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TAPT1Q6NXT6 567 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ATP6V1C2Q8NEY4 427 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DTD1Q8TEA8 209 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ST6GALNAC5Q9BVH7 336 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TOLLIPQ9H0E2 274 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 C11orf16Q9NQ32 467 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NOCTQ9UK39 431 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TRAV20A0A0B4J274 112 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 MT-ND2P03891 347 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 UBA1P22314 1058 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DNAJB1P25685 340 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SLC5A12Q1EHB4 618 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 C6orf136Q5SQH8 315 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SIDT2Q8NBJ9 832 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 RNF31Q96EP0 1072 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CRAMP1Q96RY5 1269 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 OR51E2Q9H255 320 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SLC6A5Q9Y345 797 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 RPL38P63173 70 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 AGAP7PQ5VUJ5 663 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 MPZL3Q6UWV2 235 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 BRINP3Q76B58 766 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SLC16A9Q7RTY1 509 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NRARPQ7Z6K4 114 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PHACTR4Q8IZ21 702 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ARL5BQ96KC2 179 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NEURL2Q9BR09 285 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 NTPCRQ9BSD7 190 aaKnown RBP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ARAFP10398 606 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 DCKP27707 260 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ADH7P40394 386 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 VAMP2P63027 116 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 FGL1Q08830 312 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF460Q14592 562 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 FAM183BPQ6ZVS7 135 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF280BQ86YH2 543 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ERVMER34-1Q9H9K5 563 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PUS1Q9Y606 427 aaKnown RBP eCLIP3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PSMD9O00233 223 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 IL1R2P27930 398 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SERPINF1P36955 418 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 GDF5P43026 501 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 MAP2K3P46734 347 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 TTPAP49638 278 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 GPALPP1Q8IXQ4 340 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF700Q9H0M5 742 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 KCNIP3Q9Y2W7 256 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PRORSD1PA6NEY8 169 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 PNPP00491 289 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 CELP19835 753 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 HAPLN3Q96S86 360 aa3.59□□□□□ -1.83
ATXN3-248ENST00000558190 SDCBP2Q9H190 292 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms