RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PRDX3P30048 256 aaKnown RBP11.94□□□□□ -0.5
TPM1-209ENST00000558072 PIK3CBP42338 1070 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
TPM1-209ENST00000558072 E2F1Q01094 437 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 DOC2AQ14183 400 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 FBXO48Q5FWF7 155 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ZC3H12BQ5HYM0 836 aaKnown RBP11.94□□□□□ -0.5
TPM1-209ENST00000558072 KANK2Q63ZY3 851 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 FRG2Q64ET8 278 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TMIGD1Q6UXZ0 262 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ADCK2Q7Z695 626 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 SYVN1Q86TM6 617 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 KIAA2013Q8IYS2 634 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ZNF781Q8N8C0 355 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TRPV3Q8NET8 790 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 OR52B6Q8NGF0 335 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 CNDP2Q96KP4 475 aaKnown RBP11.94□□□□□ -0.5
TPM1-209ENST00000558072 FRG2BQ96QU4 278 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 SARGQ9BW04 601 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ACAT2Q9BWD1 397 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TBC1D10AQ9BXI6 508 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 NLNQ9BYT8 704 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 BRF2Q9HAW0 419 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 ZDHHC2Q9UIJ5 367 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 TRIM33Q9UPN9 1127 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 USH1CQ9Y6N9 552 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 PCM1Q15154 2024 aa11.94□□□□□ -0.5
TPM1-209ENST00000558072 LY6G6EA0A0G2JKS1 128 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 URADA6NGE7 173 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 E7EQ34 232 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 TMX2-CTNND1H3BSU7 103 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 NDUFAB1O14561 156 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 GFRA3O60609 400 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 LYPLA1O75608 230 aaPredicted RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 OR4F21O95013 312 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CPNE6O95741 557 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CAPN1P07384 714 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CDH1P12830 882 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CD59P13987 128 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 ALOX15P16050 662 aaPredicted RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 TYRP1P17643 537 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 ACP1P24666 158 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 AHRP35869 848 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 ARL4DP49703 201 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 LIMK1P53667 647 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 INHBCP55103 352 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 ERVPABLB-1P60509 514 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CSTF3Q12996 717 aaKnown RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 MAD2L1Q13257 205 aaPredicted RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 CPSF6Q16630 551 aaKnown RBP eCLIP11.93□□□□□ -0.5
TPM1-209ENST00000558072 IMPG1Q17R60 797 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 ZXDCQ2QGD7 858 aaPredicted RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 SMU1Q2TAY7 513 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 MANEAQ5SRI9 462 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 TMTC4Q5T4D3 741 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 METTL21CQ5VZV1 264 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 TMEM71Q6P5X7 295 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 SPATA21Q7Z572 469 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 SPRED1Q7Z699 444 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 FAM129CQ86XR2 697 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 LAS2Q8IYD9 372 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 FAM9CQ8IZT9 166 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 C2orf73Q8N5S3 287 aaPredicted RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 CDYL2Q8N8U2 506 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 SRFBP1Q8NEF9 429 aaKnown RBP11.93□□□□□ -0.5
TPM1-209ENST00000558072 SELENOMQ8WWX9 145 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 NCSTNQ92542 709 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CCDC74AQ96AQ1 378 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 TCTN2Q96GX1 697 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 CCT8L2Q96SF2 557 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 DPH7Q9BTV6 452 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 U3KQA8 63 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 LAMA1P25391 3075 aa11.93□□□□□ -0.5
TPM1-209ENST00000558072 OTOGLQ3ZCN5 2332 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 KCNE1BA0A087WTH5 132 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 H7BY64 318 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 UBFD1O14562 309 aaKnown RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 CAPN5O15484 640 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 SH3BP5O60239 455 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 ZBTB11O95625 1053 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 KITP10721 976 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 TSPAN8P19075 237 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 EPORP19235 508 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 DRD4P21917 467 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 MPSTP25325 297 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 PTX3P26022 381 aaPredicted RBP11.92□□□□□ -0.5
TPM1-209ENST00000558072 GRIA3P42263 894 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 ARFIP2P53365 341 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 ARFIP1P53367 373 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 SEC24CP53992 1094 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 REEP5Q00765 189 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 TGM3Q08188 693 aa11.92□□□□□ -0.5
TPM1-209ENST00000558072 TRA2AQ13595 282 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM1-209ENST00000558072 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM1-209ENST00000558072 RBBP5Q15291 538 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms