RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 REEP5Q00765 189 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 FRG2Q64ET8 278 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 SPESP1Q6UW49 350 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 ADCK2Q7Z695 626 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 OR4K1Q8NGD4 311 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 RSC1A1Q92681 617 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 USP7Q93009 1102 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 SEC16BQ96JE7 1060 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 RILPQ96NA2 401 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 FRG2BQ96QU4 278 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 KCNK13Q9HB14 408 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 RIC8BQ9NVN3 520 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 CUEDC1Q9NWM3 386 aaPredicted RBP16.23■□□□□ 0.19
SNX1-203ENST00000558040 GEMIN8Q9NWZ8 242 aaKnown RBP16.23■□□□□ 0.19
SNX1-203ENST00000558040 POMT2Q9UKY4 750 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 ZNF490Q9ULM2 529 aaPredicted RBP16.23■□□□□ 0.19
SNX1-203ENST00000558040 BTRCQ9Y297 605 aa16.23■□□□□ 0.19
SNX1-203ENST00000558040 A0A0J9YY10 115 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 H7BY64 318 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 FLRT2O43155 660 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 DUX1O43812 170 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 RRP9O43818 475 aaKnown RBP16.22■□□□□ 0.19
SNX1-203ENST00000558040 ALDH4A1P30038 563 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 SERPINB1P30740 379 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 SLC14A1Q13336 389 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 TCHHL1Q5QJ38 904 aaPredicted RBP16.22■□□□□ 0.19
SNX1-203ENST00000558040 KIAA1614Q5VZ46 1190 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 FAM129CQ86XR2 697 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 LAS2Q8IYD9 372 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 FLVCR1-AS1Q8TAF5 88 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 SELENOMQ8WWX9 145 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 PPP1R36Q96LQ0 422 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 PRAP1Q96NZ9 151 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 DPH7Q9BTV6 452 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 RAB33BQ9H082 229 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 NT5DC2Q9H857 520 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 SLC6A20Q9NP91 592 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.22■□□□□ 0.19
SNX1-203ENST00000558040 ADGRE2Q9UHX3 823 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 TSC22D4Q9Y3Q8 395 aa16.22■□□□□ 0.19
SNX1-203ENST00000558040 SLC28A1O00337 649 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 RGS14O43566 566 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 FOXD2O60548 495 aaPredicted RBP16.21■□□□□ 0.19
SNX1-203ENST00000558040 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.19
SNX1-203ENST00000558040 LINC00032P0C843 101 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 PCNAP12004 261 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 HTR6P50406 440 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 CSNK1G2P78368 415 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 DAB2P98082 770 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 SPEM2Q0P670 501 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 ABRAXAS2Q15018 415 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 SF3A2Q15428 464 aaKnown RBP16.21■□□□□ 0.19
SNX1-203ENST00000558040 CSRP2Q16527 193 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 IMPG1Q17R60 797 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 SLC9B1Q4ZJI4 515 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 SGO1Q5FBB7 561 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 VWA5B1Q5TIE3 1220 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 TMIGD1Q6UXZ0 262 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 TTLQ8NG68 377 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 OR7G3Q8NG95 312 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 ACTRT2Q8TDY3 377 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 CCDC74AQ96AQ1 378 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 ZDHHC12Q96GR4 267 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 MAELQ96JY0 434 aaKnown RBP16.21■□□□□ 0.19
SNX1-203ENST00000558040 EBF4Q9BQW3 602 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 CCDC28BQ9BUN5 200 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 EDEM2Q9BV94 578 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 ZMYND15Q9H091 742 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 TUBB1Q9H4B7 451 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 TCF7L2Q9NQB0 619 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 SEMA4GQ9NTN9 838 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 EPHA6Q9UF33 1036 aa16.21■□□□□ 0.19
SNX1-203ENST00000558040 PCM1Q15154 2024 aa16.21■□□□□ 0.18
SNX1-203ENST00000558040 IGHV1OR21-1A0A087WYE8 117 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 IGKV1-8A0A0C4DH67 115 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TRBC2A0A5B9 178 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 SERTM1A2A2V5 107 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 CPED1A4D0V7 1026 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 EME2A4GXA9 379 aaPredicted RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 SDHDO14521 159 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 TNFSF14O43557 240 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 SLC34A2O95436 690 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 PDYNP01213 254 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 CKMT1AP12532 417 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 HSD3B1P14060 373 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 HSD3B2P26439 372 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 GSTM2P28161 218 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 EPHA3P29320 983 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 GRIA3P42263 894 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 OR1D5P58170 312 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 YBX1P67809 324 aaKnown RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 MEF2AQ02078 507 aaPredicted RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 CSTF3Q12996 717 aaKnown RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 RBBP5Q15291 538 aaKnown RBP16.2■□□□□ 0.18
SNX1-203ENST00000558040 PROX2Q3B8N5 592 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 XKR7Q5GH72 579 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 NXNQ6DKJ4 435 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 ZNF425Q6IV72 752 aa16.2■□□□□ 0.18
SNX1-203ENST00000558040 IRGCQ6NXR0 463 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms