RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 WWTR1Q9GZV5 400 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 NACA2Q9H009 215 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TOR3AQ9H497 397 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 Q9H8V8 135 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 PANK4Q9NVE7 773 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 GTSE1Q9NYZ3 720 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 COPS7AQ9UBW8 275 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 LRWD1Q9UFC0 647 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 PCDHA12Q9UN75 941 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 CHMP2BQ9UQN3 213 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 NAALAD2Q9Y3Q0 740 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 TMED3Q9Y3Q3 217 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 MAB21L2Q9Y586 359 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 KLK4Q9Y5K2 254 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.58□□□□□ -1.84
TDP1-217ENST00000557782 SPACA6W5XKT8 324 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 PTPRCP08575 1304 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 PRAG1Q86YV5 1406 aa3.58□□□□□ -1.84
TDP1-217ENST00000557782 A0A0U1RRA0 63 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 XKRY2A2RUG3 117 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PRR32B1ATL7 298 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 TMEM178BH3BS89 294 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 EEF2KO00418 725 aaKnown RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 GRID2O43424 1007 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 NME2P1O60361 137 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 CSO75390 466 aaKnown RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 TOM1L1O75674 476 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 NSD2O96028 1365 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 IFNA2P01563 188 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PROS1P07225 676 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ASNSP08243 561 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 NHLRC4P0CG21 123 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 CALB2P22676 271 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 IL4RP24394 825 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PTPN4P29074 926 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 STIP1P31948 543 aaKnown RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 MNDAP41218 407 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PTGER3P43115 390 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 GLIPR1P48060 266 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ENTPD1P49961 510 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 RASSF2P50749 326 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 NR0B1P51843 470 aaKnown RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 PDX1P52945 283 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 VCPP55072 806 aaKnown RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 KCNK10P57789 538 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 SELENOVP59797 346 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PDE1BQ01064 536 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ID2Q02363 134 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 KLC1Q07866 573 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 KIF5AQ12840 1032 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 DMP1Q13316 513 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 MXD4Q14582 209 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 INPP5JQ15735 1006 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 PDK4Q16654 411 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 CA9Q16790 459 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PHKG1Q16816 387 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 XKR9Q5GH70 373 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ASPHD1Q5U4P2 390 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 IL23RQ5VWK5 629 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ZNF770Q6IQ21 691 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 TTC27Q6P3X3 843 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PARM1Q6UWI2 310 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 LINGO4Q6UY18 593 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 Q75L30 129 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ZNF444Q8N0Y2 327 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 C8orf58Q8NAV2 365 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 STKLD1Q8NE28 680 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 STEAP2Q8NFT2 490 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 OR5R1Q8NH85 324 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 RNF128Q8TEB7 428 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 TMEM174Q8WUU8 243 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 CASP10Q92851 521 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 TSACCQ96A04 125 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 MAGED4Q96JG8 741 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 APOLD1Q96LR9 279 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 GUCD1Q96NT3 240 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PLIN2Q99541 437 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 DUSP26Q9BV47 211 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 LRRC2Q9BYS8 371 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 PCDH11YQ9BZA8 1340 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 GCOM2Q9BZD3 368 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 EGLN1Q9GZT9 426 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 MIS12Q9H081 205 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 LRMDAQ9H2I8 198 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ACTL8Q9H568 366 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ZDHHC6Q9H6R6 413 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 COG4Q9H9E3 785 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ACKR4Q9NPB9 350 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ACOXLQ9NUZ1 547 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 RBM28Q9NW13 759 aaKnown RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 ASB6Q9NWX5 421 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 C6orf203Q9P0P8 240 aaPredicted RBP3.57□□□□□ -1.84
TDP1-217ENST00000557782 PTGFRNQ9P2B2 879 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 DISP3Q9P2K9 1392 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 ATXN10Q9UBB4 475 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 IL36RNQ9UBH0 155 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 IL20RAQ9UHF4 553 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 NARFQ9UHQ1 456 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 C2CD2Q9Y426 696 aa3.57□□□□□ -1.84
TDP1-217ENST00000557782 RNF114Q9Y508 228 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms