RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PAIP2Q9BPZ3 127 aaKnown RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 C1QTNF3Q9BXJ4 246 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 NOL11Q9H8H0 719 aaKnown RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 IPPKQ9H8X2 491 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 PDE7BQ9NP56 450 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 MID2Q9UJV3 735 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 BTRCQ9Y297 605 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 LOXL2Q9Y4K0 774 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 HEATR5BQ9P2D3 2071 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 PTPRBP23467 1997 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 EFCAB7A8K855 629 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 FKBP9O95302 570 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 BPGMP07738 259 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 DHRS4L1P0CG22 281 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 GPR19Q15760 415 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 FBXO42Q6P3S6 717 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 FOXR1Q6PIV2 292 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 NXPE4Q6UWF7 544 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 ZCCHC23Q6ZST2 131 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 RAB11FIP2Q7L804 512 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 KMT5CQ86Y97 462 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 ZNF483Q8TF39 744 aaPredicted RBP14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CCDC126Q96EE4 140 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 LIN37Q96GY3 246 aaPredicted RBP14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CDK15Q96Q40 435 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CMKLR1Q99788 373 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CELSR3Q9NYQ7 3312 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 H3BQF6 201 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 OR7A17O14581 309 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 FGF3P11487 239 aaPredicted RBP14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CD22P20273 847 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CCR8P51685 355 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 DNAJB13P59910 316 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 CYP4F3Q08477 520 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 XKR6Q5GH73 641 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 C3orf38Q5JPI3 329 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 METTL2BQ6P1Q9 378 aaKnown RBP14.66□□□□□ -0.06
NEDD1-213ENST00000557644 TRPC4APQ8TEL6 797 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 RNF31Q96EP0 1072 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 GSTO2Q9H4Y5 243 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 TMEM184CQ9NVA4 438 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 SIDT1Q9NXL6 827 aaKnown RBP14.66□□□□□ -0.06
NEDD1-213ENST00000557644 GPRC5BQ9NZH0 403 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 KLK13Q9UKR3 277 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 SNX7Q9UNH6 387 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 SATB2Q9UPW6 733 aa14.66□□□□□ -0.06
NEDD1-213ENST00000557644 AKAP13Q12802 2813 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 A0A0J9YVX5 310 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 TRIM13O60858 407 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 GABRA4P48169 554 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 CLCQ05315 142 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 FOXM1Q08050 763 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 CHIT1Q13231 466 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 DOC2AQ14183 400 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 FRMPD2BQ6IN97 320 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 CACTIN-AS1Q8N1I8 211 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 DNAJC22Q8N4W6 341 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 BMPERQ8N8U9 685 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 OR4K1Q8NGD4 311 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 PPP4R1Q8TF05 950 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 PMEPA1Q969W9 287 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 GATA5Q9BWX5 397 aaPredicted RBP14.65□□□□□ -0.06
NEDD1-213ENST00000557644 APMAPQ9HDC9 416 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 GEMIN8Q9NWZ8 242 aaKnown RBP14.65□□□□□ -0.06
NEDD1-213ENST00000557644 PILRAQ9UKJ1 303 aa14.65□□□□□ -0.06
NEDD1-213ENST00000557644 TMX2-CTNND1H3BSU7 103 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 CLGNO14967 610 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 LCMT2O60294 686 aaKnown RBP14.65□□□□□ -0.07
NEDD1-213ENST00000557644 KATNA1O75449 491 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 WFS1O76024 890 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 C1GALT1C1LP0DN25 315 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 ETV5P41161 510 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 SLC18A1P54219 525 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 IRF8Q02556 426 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 CES4AQ5XG92 561 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 OR6C1Q96RD1 312 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 CTRCQ99895 268 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 FGF21Q9NSA1 209 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 NKIRAS1Q9NYS0 192 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 WASF3Q9UPY6 502 aa14.65□□□□□ -0.07
NEDD1-213ENST00000557644 CCDC187A0A096LP49 1063 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 LOC105369274A0A096LPK9 316 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 LOC102723532A0A0G2JNH3 316 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 STATHP02808 62 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 SPTBP11277 2137 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
NEDD1-213ENST00000557644 SLBPQ14493 270 aaKnown RBP eCLIP14.64□□□□□ -0.07
NEDD1-213ENST00000557644 RBBP7Q16576 425 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 HHATQ5VTY9 493 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 ATG9BQ674R7 924 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 MYLK4Q86YV6 388 aaPredicted RBP14.64□□□□□ -0.07
NEDD1-213ENST00000557644 NUDCD3Q8IVD9 361 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 OR4N4Q8N0Y3 316 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 ATP6V1E2Q96A05 226 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 CAPS2Q9BXY5 557 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 PELI2Q9HAT8 420 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 ANKMY1Q9P2S6 941 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 PISDQ9UG56 409 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 ZNF225Q9UK10 706 aa14.64□□□□□ -0.07
NEDD1-213ENST00000557644 ADAMTS20P59510 1910 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms