RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 MAPK11Q15759 364 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CLLU1OSQ5K130 101 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ATAD3BQ5T9A4 648 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 FAM171A1Q5VUB5 890 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 FAM151BQ6UXP7 276 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 GPR155Q7Z3F1 870 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ENTHD1Q8IYW4 607 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 POC5Q8NA72 575 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 LKAAEAR1Q8TD35 194 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 METTL2AQ96IZ6 378 aaKnown RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 HSH2DQ96JZ2 352 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ZFYVE1Q9HBF4 777 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ABCB10Q9NRK6 738 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 NPAP1Q9NZP6 1156 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 PLK4O00444 970 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 FPGTO14772 594 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 DYRK3O43781 588 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 PCDHGA12O60330 932 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 MED26O95402 600 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CD160O95971 181 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 COL6A1P12109 1028 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ENGP17813 658 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ETV6P41212 452 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 MAPK8P45983 427 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 VLDLRP98155 873 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ARHGEF7Q14155 803 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 EIF4HQ15056 248 aaKnown RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CPSF6Q16630 551 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 SMN1Q16637 294 aaKnown RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ADGRF1Q5T601 910 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CXorf57Q6NSI4 855 aaKnown RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 SLC46A3Q7Z3Q1 461 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 ANKRD46Q86W74 232 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 DENND1CQ8IV53 801 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CHTF18Q8WVB6 975 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 APH1BQ8WW43 257 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 PIH1D2Q8WWB5 315 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 RPL3LQ92901 407 aaKnown RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 EID2BQ96D98 161 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CRELD1Q96HD1 420 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 TSSK3Q96PN8 268 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 CRLS1Q9UJA2 301 aa15.8■□□□□ 0.12
SHMT2-232ENST00000557487 TSR3Q9UJK0 312 aaKnown RBP15.8■□□□□ 0.12
SHMT2-232ENST00000557487 A8MVJ9 347 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 MAGEB17A8MXT2 336 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 hCG_2039718K7EN88 272 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 HAT1O14929 419 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 CDK1P06493 297 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 C8GP07360 202 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 GGT2P36268 569 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 CREMQ03060 361 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 TIGD6Q17RP2 521 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 TPRG1LQ5T0D9 272 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 HECTD3Q5T447 861 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 ZNF551Q7Z340 670 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-232ENST00000557487 UBE2Q1Q7Z7E8 422 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 ZSWIM9Q86XI8 627 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 CCDC71Q8IV32 467 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-232ENST00000557487 DEPDC4Q8N2C3 294 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 OR8J2Q8NGG1 315 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 C9orf43Q8TAL5 461 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-232ENST00000557487 PANX1Q96RD7 426 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 PCDH12Q9NPG4 1184 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 ADPRHL2Q9NX46 363 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 GPRC5BQ9NZH0 403 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 PADI2Q9Y2J8 665 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 PCDHGA6Q9Y5G7 932 aa15.79■□□□□ 0.12
SHMT2-232ENST00000557487 CLCA1A8K7I4 914 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 LOC110117498-PIK3R3F6TDL0 507 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 AMD1P17707 334 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 ITGB6P18564 788 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 LIPAP38571 399 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 RPIAP49247 311 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 ARPP19P56211 112 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.78■□□□□ 0.12
SHMT2-232ENST00000557487 LRRC74AQ0VAA2 488 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 ELAVL2Q12926 359 aaKnown RBP15.78■□□□□ 0.12
SHMT2-232ENST00000557487 CSTF3Q12996 717 aaKnown RBP15.78■□□□□ 0.12
SHMT2-232ENST00000557487 STEAP3Q658P3 488 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 PTOV1Q86YD1 416 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 DNAJC22Q8N4W6 341 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 PAF1Q8N7H5 531 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 PIK3R3Q92569 461 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 DNASE1L2Q92874 299 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 PYCR2Q96C36 320 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 COL21A1Q96P44 957 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 BOCQ9BWV1 1114 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 RASSF1Q9NS23 344 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 ARL15Q9NXU5 204 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 SPASTQ9UBP0 616 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 KLK4Q9Y5K2 254 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 PRSS21Q9Y6M0 314 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 GLYATL1P3A0A0U1RQE8 302 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 M0R082 166 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 RGS13O14921 159 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 ADAMDEC1O15204 470 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 GPR39O43194 453 aa15.78■□□□□ 0.12
SHMT2-232ENST00000557487 DLGAP3O95886 979 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms