RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CNPY4Q8N129 248 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 LSM14AQ8ND56 463 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ABHD11Q8NFV4 315 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 OR4K1Q8NGD4 311 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 STARD8Q92502 1023 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 RERGQ96A58 199 aaPredicted RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 WBP1Q96G27 269 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 GBP5Q96PP8 586 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 OR4K3Q96R72 315 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 UBL7Q96S82 380 aaPredicted RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 EGFL8Q99944 293 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 DHRS4Q9BTZ2 278 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 TXLNGYQ9BZA5 131 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 CNOT10Q9H9A5 744 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 STARD5Q9NSY2 213 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 CUTCQ9NTM9 273 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 CUEDC1Q9NWM3 386 aaPredicted RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 DHCR7Q9UBM7 475 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 GPN3Q9UHW5 284 aaPredicted RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ZNF180Q9UJW8 692 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 MRPS18BQ9Y676 258 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 MDC1Q14676 2089 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ZZEF1O43149 2961 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 A0A096LPK6 155 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 A0A1B0GX78 115 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 CCDC189A1A4V9 331 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 C9J4A7 227 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 HAT1O14929 419 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 DSCR3O14972 297 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 RIPK2O43353 540 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 NRP2O60462 931 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 ONECUT2O95948 504 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 C2P06681 752 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 CAPN1P07384 714 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 TNFRSF8P28908 595 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 TYK2P29597 1187 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 GGT5P36269 586 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 SERPINB8P50452 374 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 RPS15AP62244 130 aaKnown RBP10.21□□□□□ -0.77
LINC00239-201ENST00000556973 CYP4F2P78329 520 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 CSNK1G2P78368 415 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 DLG1Q12959 904 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 BMPR2Q13873 1038 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 ERV3-1Q14264 604 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 ACAP2Q15057 778 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 OR4D1Q15615 310 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 FAM83EQ2M2I3 478 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 PRTGQ2VWP7 1150 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 TAF1BQ53T94 588 aaPredicted RBP10.21□□□□□ -0.77
LINC00239-201ENST00000556973 C1orf189Q5VU69 101 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 GARNL3Q5VVW2 1013 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 SULT1C3Q6IMI6 304 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 PRMT9Q6P2P2 845 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 C16orf46Q6P387 395 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 SYVN1Q86TM6 617 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 THOC6Q86W42 341 aaKnown RBP10.21□□□□□ -0.77
LINC00239-201ENST00000556973 KLHDC8AQ8IYD2 350 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 RHEBL1Q8TAI7 183 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 UHMK1Q8TAS1 419 aaKnown RBP10.21□□□□□ -0.77
LINC00239-201ENST00000556973 TTC9Q92623 222 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 PTERQ96BW5 349 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 RHBDF1Q96CC6 855 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 NXNL1Q96CM4 212 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 PAFAH2Q99487 392 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 CAPS2Q9BXY5 557 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 UNKQ9C0B0 810 aaKnown RBP10.21□□□□□ -0.77
LINC00239-201ENST00000556973 ACTL8Q9H568 366 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 SNX15Q9NRS6 342 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 IFT80Q9P2H3 777 aaPredicted RBP10.21□□□□□ -0.77
LINC00239-201ENST00000556973 RNF112Q9ULX5 631 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 SLC22A14Q9Y267 594 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 DYRK1BQ9Y463 629 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 KCNE2Q9Y6J6 123 aa10.21□□□□□ -0.77
LINC00239-201ENST00000556973 CFAP47Q6ZTR5 3102 aa10.21□□□□□ -0.78
LINC00239-201ENST00000556973 ANKRD11Q6UB99 2663 aaPredicted RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 EXOC1LA0A1B0GW35 172 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 NCF1BA6NI72 391 aaPredicted RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 NCF1CA8MVU1 366 aaPredicted RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ATXN7O15265 892 aaPredicted RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 KLHL2O95198 593 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SLU7O95391 586 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ALBP02768 609 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 ALDOAP04075 364 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 S100BP04271 92 aaPredicted RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SNRPAP09012 282 aaKnown RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SPTBP11277 2137 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CDH1P12830 882 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 NCF1P14598 390 aaPredicted RBP10.2□□□□□ -0.78
LINC00239-201ENST00000556973 GNAZP19086 355 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 TFEBP19484 476 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SLC6A12P48065 614 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 KCNC1P48547 511 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CCR8P51685 355 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 CDC20Q12834 499 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 SLC29A2Q14542 456 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 NCF4Q15080 339 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 UGT8Q16880 541 aa10.2□□□□□ -0.78
LINC00239-201ENST00000556973 MUM1Q2TAK8 710 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms