RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ATP6V0D1P61421 351 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 ERV3-1Q14264 604 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 PRTGQ2VWP7 1150 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 FAM214AQ32MH5 1076 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 NKAIN1Q4KMZ8 207 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 BORAQ6PGQ7 559 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 TTLL10Q6ZVT0 673 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 FRA10AC1Q70Z53 315 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 ALKBH8Q96BT7 664 aaKnown RBP21.85■■□□□ 1.09
TDP1-216ENST00000556867 PRAP1Q96NZ9 151 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 RHOXF2Q9BQY4 288 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 SYNPO2LQ9H987 977 aa21.85■■□□□ 1.09
TDP1-216ENST00000556867 ONECUT2O95948 504 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 ANXA5P08758 320 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 FURINP09958 794 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 SLC35E2BP0CK96 405 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 CD1DP15813 335 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 NPPBP16860 134 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 CRABP2P29373 138 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 EMP3P54852 163 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 UGT8Q16880 541 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 CMC1Q7Z7K0 106 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 SLC39A7Q92504 469 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 PYCR2Q96C36 320 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 OR4K3Q96R72 315 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 TCFL5Q9UL49 500 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 PADI2Q9Y2J8 665 aa21.84■■□□□ 1.09
TDP1-216ENST00000556867 SMG1Q96Q15 3661 aaKnown RBP21.84■■□□□ 1.09
TDP1-216ENST00000556867 HYKKA2RU49 373 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 CDC14CA4D256 554 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 EIF2S1P05198 315 aaKnown RBP21.83■■□□□ 1.09
TDP1-216ENST00000556867 ITGAXP20702 1163 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 ALAS2P22557 587 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 HNMTP50135 292 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 CSNK1G2P78368 415 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 NFKB2Q00653 900 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 IL10RAQ13651 578 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 COL9A2Q14055 689 aaPredicted RBP21.83■■□□□ 1.09
TDP1-216ENST00000556867 SPATA6LQ8N4H0 392 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 CSNK1A1LQ8N752 337 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 RERGQ96A58 199 aaPredicted RBP21.83■■□□□ 1.09
TDP1-216ENST00000556867 MRRFQ96E11 262 aaKnown RBP21.83■■□□□ 1.09
TDP1-216ENST00000556867 UNKQ9C0B0 810 aaKnown RBP21.83■■□□□ 1.09
TDP1-216ENST00000556867 SLC22A11Q9NSA0 550 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 IFT80Q9P2H3 777 aaPredicted RBP21.83■■□□□ 1.09
TDP1-216ENST00000556867 POLHQ9Y253 713 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 CCDC88CQ9P219 2028 aa21.83■■□□□ 1.09
TDP1-216ENST00000556867 HMX2A2RU54 273 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 CD63P08962 238 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 CDH1P12830 882 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 SLC26A3P40879 764 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 CSRP3P50461 194 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 RPS15AP62244 130 aaKnown RBP21.82■■□□□ 1.08
TDP1-216ENST00000556867 CSHL1Q14406 222 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 TGFBIQ15582 683 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 MUM1Q2TAK8 710 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 DEFB109BQ30KR1 87 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 RAPH1Q70E73 1250 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 CCDC91Q7Z6B0 441 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 PLD3Q8IV08 490 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 ABHD11Q8NFV4 315 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 SLC44A1Q8WWI5 657 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 FKBP10Q96AY3 582 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 C10orf90Q96M02 699 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 EGFL8Q99944 293 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 ARHGAP9Q9BRR9 750 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 NDOR1Q9UHB4 597 aa21.82■■□□□ 1.08
TDP1-216ENST00000556867 GPN3Q9UHW5 284 aaPredicted RBP21.82■■□□□ 1.08
TDP1-216ENST00000556867 KALRNO60229 2985 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 COL6A6A6NMZ7 2263 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 KCNE1BA0A087WTH5 132 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 TXNDC9O14530 226 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 MED26O95402 600 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 PIM1P11309 404 aaPredicted RBP21.81■■□□□ 1.08
TDP1-216ENST00000556867 CCR10P46092 362 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 BMPR2Q13873 1038 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 SLC9A5Q14940 896 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 UAP1Q16222 522 aaPredicted RBP21.81■■□□□ 1.08
TDP1-216ENST00000556867 CDKL4Q5MAI5 379 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 MROH9Q5TGP6 573 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 MLIPQ5VWP3 458 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 MRPL14Q6P1L8 145 aaKnown RBP21.81■■□□□ 1.08
TDP1-216ENST00000556867 TBC1D1Q86TI0 1168 aaPredicted RBP21.81■■□□□ 1.08
TDP1-216ENST00000556867 GPSM1Q86YR5 675 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 KLHDC8AQ8IYD2 350 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 ADAMTS17Q8TE56 1095 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 KIAA1191Q96A73 305 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 PTERQ96BW5 349 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 RHBDF1Q96CC6 855 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 THAP11Q96EK4 314 aa21.81■■□□□ 1.08
TDP1-216ENST00000556867 RUVBL1Q9Y265 456 aaKnown RBP21.81■■□□□ 1.08
TDP1-216ENST00000556867 A0A087WUV0 522 aaPredicted RBP21.8■■□□□ 1.08
TDP1-216ENST00000556867 KLF7O75840 302 aaPredicted RBP21.8■■□□□ 1.08
TDP1-216ENST00000556867 GMPRP36959 345 aa21.8■■□□□ 1.08
TDP1-216ENST00000556867 CCR8P51685 355 aa21.8■■□□□ 1.08
TDP1-216ENST00000556867 LY6DQ14210 128 aa21.8■■□□□ 1.08
TDP1-216ENST00000556867 OR4D1Q15615 310 aa21.8■■□□□ 1.08
TDP1-216ENST00000556867 HKDC1Q2TB90 917 aa21.8■■□□□ 1.08
TDP1-216ENST00000556867 FAM69BQ5VUD6 431 aa21.8■■□□□ 1.08
TDP1-216ENST00000556867 GARNL3Q5VVW2 1013 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms