RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CUTCQ9NTM9 273 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 ZDHHC18Q9NUE0 388 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 DHCR7Q9UBM7 475 aaKnown RBP13.5□□□□□ -0.25
SLIRP-207ENST00000556831 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
SLIRP-207ENST00000556831 MAN2B2Q9Y2E5 1009 aa13.5□□□□□ -0.25
SLIRP-207ENST00000556831 UBR5O95071 2799 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-207ENST00000556831 COL12A1Q99715 3063 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 CXorf49A8MYA2 514 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 TXNDC9O14530 226 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 CTSVO60911 334 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 TSPAN12O95859 305 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 RECKO95980 971 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 S100BP04271 92 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 ANXA5P08758 320 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 FOLR3P41439 243 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 NAE1Q13564 534 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 TBR1Q16650 682 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 LINC00303Q3SY05 128 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 NKAIN1Q4KMZ8 207 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 WASHC2DQ5SRD0 308 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 MBOAT1Q6ZNC8 495 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 TBC1D1Q86TI0 1168 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 MRRFQ96E11 262 aaKnown RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 GPR22Q99680 433 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 CAB39LQ9H9S4 337 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 DMGDHQ9UI17 866 aaKnown RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 MTO1Q9Y2Z2 717 aaKnown RBP13.49□□□□□ -0.25
SLIRP-207ENST00000556831 DYRK1BQ9Y463 629 aa13.49□□□□□ -0.25
SLIRP-207ENST00000556831 FER1L5A0AVI2 2057 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 DSCR3O14972 297 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 PRPF4O43172 522 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLIRP-207ENST00000556831 NRP2O60462 931 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 CCDC166P0CW27 439 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 CRABP2P29373 138 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 HNMTP50135 292 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 RAB10P61026 200 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 ATP6V0D1P61421 351 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 RPS15AP62244 130 aaKnown RBP13.48□□□□□ -0.25
SLIRP-207ENST00000556831 RPS18P62269 152 aaKnown RBP13.48□□□□□ -0.25
SLIRP-207ENST00000556831 YBX1P67809 324 aaKnown RBP13.48□□□□□ -0.25
SLIRP-207ENST00000556831 SLC9A5Q14940 896 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 MUM1Q2TAK8 710 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 FAM69BQ5VUD6 431 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 FRMPD2BQ6IN97 320 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 LCN10Q6JVE6 187 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 FAM198BQ6UWH4 519 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 PAQR7Q86WK9 346 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 RAB43Q86YS6 212 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 CEP97Q8IW35 865 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 TMEM151BQ8IW70 566 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 CSNK1A1LQ8N752 337 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 THAP4Q8WY91 577 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 FBXL8Q96CD0 374 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 GBP5Q96PP8 586 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 DERL2Q9GZP9 239 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 STARD5Q9NSY2 213 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 TMEM184CQ9NVA4 438 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 OARD1Q9Y530 152 aa13.48□□□□□ -0.25
SLIRP-207ENST00000556831 C2CD3Q4AC94 2353 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 COL6A6A6NMZ7 2263 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 NOTCH2Q04721 2471 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 HYKKA2RU49 373 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 H7BY64 318 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 CDC7O00311 574 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 TERTO14746 1132 aaKnown RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 PHGDHO43175 533 aaKnown RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 WISP1O95388 367 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 ACSL3O95573 720 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 INHBAP08476 426 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 FAM87AP0C7U9 286 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 CCR8P51685 355 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 POLE2P56282 527 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 EFTUD2Q15029 972 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 TSNQ15631 228 aaKnown RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 NDUFA9Q16795 377 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 UGT8Q16880 541 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 LCTLQ6UWM7 567 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 ZNF517Q6ZMY9 492 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 CCDC91Q7Z6B0 441 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 TCAIMQ8N3R3 496 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 EXD3Q8N9H8 876 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 PYCR2Q96C36 320 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 PRAP1Q96NZ9 151 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 ADNPQ9H2P0 1102 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 CDC42EP4Q9H3Q1 356 aaKnown RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 G3BP2Q9UN86 482 aaKnown RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 CDC14AQ9UNH5 594 aa13.47□□□□□ -0.25
SLIRP-207ENST00000556831 PTRH2Q9Y3E5 179 aaKnown RBP13.47□□□□□ -0.25
SLIRP-207ENST00000556831 PCSK5Q92824 1860 aa13.46□□□□□ -0.25
SLIRP-207ENST00000556831 PCM1Q15154 2024 aa13.46□□□□□ -0.25
SLIRP-207ENST00000556831 SPENQ96T58 3664 aaKnown RBP13.46□□□□□ -0.25
SLIRP-207ENST00000556831 FITM1A5D6W6 292 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms