RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PEBP1P30086 187 aaKnown RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SLC1A2P43004 574 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MAGEA3P43357 314 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 BDKRB1P46663 353 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CLCN7P51798 805 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PNLIPRP1P54315 467 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 VSX2P58304 361 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ABATP80404 500 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PRDX1Q06830 199 aaKnown RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 GRB7Q14451 532 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MORF4L2Q15014 288 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 KCTD19Q17RG1 926 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MUM1Q2TAK8 710 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 BBS9Q3SYG4 887 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SPANXN3Q5MJ09 141 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 RNASEH2BQ5TBB1 312 aaKnown RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 LCN10Q6JVE6 187 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PRMT9Q6P2P2 845 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 FAM198BQ6UWH4 519 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 KIAA0408Q6ZU52 694 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 OVCH1Q7RTY7 1134 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ADCK2Q7Z695 626 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 KLHL7Q8IXQ5 586 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 OR2A1Q8NGT9 310 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ASB11Q8WXH4 323 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SLCO2A1Q92959 643 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 FKBP10Q96AY3 582 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 LRRC39Q96DD0 335 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SIGLEC10Q96LC7 697 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 NAPGQ99747 312 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ZFYVE21Q9BQ24 234 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 DPH7Q9BTV6 452 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 TRIM54Q9BYV2 358 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 GSX2Q9BZM3 304 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PCBD2Q9H0N5 130 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 EPN3Q9H201 632 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 WDR54Q9H977 334 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ATP13A2Q9NQ11 1180 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SLAMF7Q9NQ25 335 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 IARS2Q9NSE4 1012 aaKnown RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ABCF3Q9NUQ8 709 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ANKMY1Q9P2S6 941 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 KLK4Q9Y5K2 254 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SCN8AQ9UQD0 1980 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 RP1L1Q8IWN7 2480 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 A0A0J9YVX5 310 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 HYKKA2RU49 373 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 H3BMH7 237 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CCDC188H7C350 402 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PYCARD-AS1I3L0S3 204 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MYO1CO00159 1063 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 DSCR3O14972 297 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 PDPK1O15530 556 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 VPS4BO75351 444 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 UBR5O95071 2799 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SLC16A8O95907 504 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MPC1LP0DKB6 136 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 HRH2P25021 359 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 GRK3P35626 688 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 GABRA4P48169 554 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ARL4CP56559 192 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CHAF1BQ13112 559 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CUL1Q13616 776 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ATP1A4Q13733 1029 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 GBX1Q14549 363 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CRYMQ14894 314 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CCSMST1Q4G0I0 132 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 DCAF10Q5QP82 559 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF385CQ66K41 422 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 FCRL6Q6DN72 434 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 SUSD1Q6UWL2 747 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 UBE2R2Q712K3 238 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MRGPREQ86SM8 312 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 MYO1HQ8N1T3 1032 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 FBXO15Q8NCQ5 510 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ADAMTS17Q8TE56 1095 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CCDC138Q96M89 665 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 GPR21Q99679 349 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 YIPF2Q9BWQ6 316 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF304Q9HCX3 659 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 ZFATQ9P243 1243 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 CDC23Q9UJX2 597 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 VPS4AQ9UN37 437 aa7.01□□□□□ -1.29
SCFD1-222ENST00000556768 FLNCQ14315 2725 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 FITM1A5D6W6 292 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 ARHGEF33A8MVX0 844 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 GFYI3L273 518 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 AGPSO00116 658 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 HCRTR1O43613 425 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 PRICKLE3O43900 615 aaPredicted RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 C8GP07360 202 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 ANXA5P08758 320 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 ACPPP15309 386 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 EZRP15311 586 aaKnown RBP7□□□□□ -1.29
SCFD1-222ENST00000556768 MMP11P24347 488 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CCND1P24385 295 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 MCM3P25205 808 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 PSMB5P28074 263 aa7□□□□□ -1.29
SCFD1-222ENST00000556768 CARSP49589 748 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms