RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 POT1Q9NUX5 634 aa10.43□□□□□ -0.74
LINC01550-206ENST00000556462 PCDHB11Q9Y5F2 797 aa10.43□□□□□ -0.74
LINC01550-206ENST00000556462 WDFY4Q6ZS81 3184 aa10.43□□□□□ -0.74
LINC01550-206ENST00000556462 BTN3A3O00478 584 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 GYG2O15488 501 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 GSC2O15499 205 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 HRO43593 1189 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 VIPP01282 170 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 CHRM5P08912 532 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 HSD3B1P14060 373 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 HSD3B2P26439 372 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ZFP36L2P47974 494 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 UFM1P61960 85 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 DDX39BQ13838 428 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 RPS6KA2Q15349 733 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ELOCQ15369 112 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 HIST2H2ACQ16777 129 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 PMS2CLQ68D20 193 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 HIST2H2AA3Q6FI13 130 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 TMIGD1Q6UXZ0 262 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 FAM20CQ8IXL6 584 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 PROKR1Q8TCW9 393 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 GAB3Q8WWW8 586 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 C11orf24Q96F05 449 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 CMTM7Q96FZ5 175 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 RTKNQ9BST9 563 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 CADM1Q9BY67 442 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 PELI2Q9HAT8 420 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 SLC52A3Q9NQ40 469 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 TMEM74BQ9NUR3 256 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 NOP53Q9NZM5 478 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 VPS29Q9UBQ0 182 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 TSC22D4Q9Y3Q8 395 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 THADAQ6YHU6 1953 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 FOXE1O00358 373 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 YY2O15391 372 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 GPR37L1O60883 481 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 KRT16P08779 473 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 PCNAP12004 261 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 NQO1P15559 274 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 AMD1P17707 334 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 IL12AP29459 219 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 CCR8P51685 355 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 HNRNPKP61978 463 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 RPS13P62277 151 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 CSNK1G2P78368 415 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 SLC25A3Q00325 362 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 MAD2L1Q13257 205 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ZNF423Q2M1K9 1284 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 PDCD4Q53EL6 469 aaKnown RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 C10orf62Q5T681 223 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 CYP20A1Q6UW02 462 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 VN1R5Q7Z5H4 357 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 TRIM48Q8IWZ4 208 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 FBXL6Q8N531 539 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ANKRD53Q8N9V6 530 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 OR2L3Q8NG85 312 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 LMX1AQ8TE12 382 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ZDHHC1Q8WTX9 485 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 NELL1Q92832 810 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 REPS1Q96D71 796 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 SRMSQ9H3Y6 488 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ASIC5Q9NY37 505 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 ZIM2Q9NZV7 527 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 DLGAP4Q9Y2H0 992 aa10.42□□□□□ -0.74
LINC01550-206ENST00000556462 POLR3HQ9Y535 204 aaPredicted RBP10.42□□□□□ -0.74
LINC01550-206ENST00000556462 A0A1B0GVT2 93 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 CFAP73A6NFT4 308 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 C9JVG2 144 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 FBP2O00757 339 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 TBX6O95947 436 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 SNRPB2P08579 225 aaKnown RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 BCKDHAP12694 445 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 PIK3CBP42338 1070 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 DHPSP49366 369 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 TBL3Q12788 808 aaKnown RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 SF1Q15637 639 aaKnown RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 PLK5Q496M5 336 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 LYSMD4Q5XG99 296 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 BLOC1S3Q6QNY0 202 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 KRT78Q8N1N4 520 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 DTWD2Q8NBA8 298 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 ZNF548Q8NEK5 533 aaPredicted RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 FLVCR1-AS1Q8TAF5 88 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 UBE2E3Q969T4 207 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 FCRL1Q96LA6 429 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 AIF1LQ9BQI0 150 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 RHBGQ9H310 441 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 SLC6A20Q9NP91 592 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 DMRT3Q9NQL9 472 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 SPASTQ9UBP0 616 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 BAIAP2L1Q9UHR4 511 aa10.41□□□□□ -0.74
LINC01550-206ENST00000556462 EIF3LQ9Y262 564 aaKnown RBP10.41□□□□□ -0.74
LINC01550-206ENST00000556462 FEZF1A0PJY2 475 aa10.4□□□□□ -0.74
LINC01550-206ENST00000556462 AIM2O14862 343 aa10.4□□□□□ -0.74
LINC01550-206ENST00000556462 AQP9O43315 295 aa10.4□□□□□ -0.74
LINC01550-206ENST00000556462 LCMT2O60294 686 aaKnown RBP10.4□□□□□ -0.74
LINC01550-206ENST00000556462 NRP2O60462 931 aa10.4□□□□□ -0.74
LINC01550-206ENST00000556462 SLC22A3O75751 556 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms