RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SIAH3Q8IW03 269 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 ZC3H7AQ8IWR0 971 aaKnown RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 KATNAL2Q8IYT4 538 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 RERGQ96A58 199 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 RAD51AP1Q96B01 352 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 FAM118BQ9BPY3 351 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 TGIF2Q9GZN2 237 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 DRC3Q9H069 523 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
ACTN1-219ENST00000556432 GSX1Q9H4S2 264 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 C19orf25Q9UFG5 118 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-219ENST00000556432 DNHD1Q96M86 4753 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 ASPDHA6ND91 283 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 IQCF5A8MTL0 148 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 ADAM10O14672 748 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 TPOP07202 933 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 MARCKSL1P49006 195 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 EMP3P54852 163 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 FOLH1Q04609 750 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 CEBPEQ15744 281 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 CCDC38Q502W7 563 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 LRRC8BQ6P9F7 803 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 CPEB2Q7Z5Q1 589 aaKnown RBP13.17□□□□□ -0.3
ACTN1-219ENST00000556432 CD163Q86VB7 1156 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 CRLF3Q8IUI8 442 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 ACTL9Q8TC94 416 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 LKAAEAR1Q8TD35 194 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 ASB5Q8WWX0 329 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 SCMH1Q96GD3 660 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 FOXC2Q99958 501 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 UCK2Q9BZX2 261 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 VN1R1Q9GZP7 353 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 LRRC40Q9H9A6 602 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 KCNJ16Q9NPI9 418 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-219ENST00000556432 CCM2LQ9NUG4 571 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-219ENST00000556432 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 TSR3Q9UJK0 312 aaKnown RBP13.17□□□□□ -0.3
ACTN1-219ENST00000556432 RUVBL2Q9Y230 463 aaKnown RBP13.17□□□□□ -0.3
ACTN1-219ENST00000556432 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
ACTN1-219ENST00000556432 KLK4Q9Y5K2 254 aa13.17□□□□□ -0.3
ACTN1-219ENST00000556432 OR2A25A4D2G3 310 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 GPC4O75487 556 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 SP1P08047 785 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 RBP3P10745 1247 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 IGFBP2P18065 325 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 CHRNB4P30926 498 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 PTGER1P34995 402 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 ASTE1Q2TB18 679 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-219ENST00000556432 FBXO42Q6P3S6 717 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 AFTPHQ6ULP2 937 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 TAOK1Q7L7X3 1001 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-219ENST00000556432 KRT222Q8N1A0 295 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 SLC5A8Q8N695 610 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 OR2A1Q8NGT9 310 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 FOPNLQ96NB1 174 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 MRPS30Q9NP92 439 aaKnown RBP13.16□□□□□ -0.3
ACTN1-219ENST00000556432 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
ACTN1-219ENST00000556432 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 USP27XA6NNY8 438 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 TFECO14948 347 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 MAN1A2O60476 641 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 SLC25A12O75746 678 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 C1orf105O95561 183 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 MSX1P28360 303 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 RPA3P35244 121 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 PTGS2P35354 604 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 AVPR1BP47901 424 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 EFNA3P52797 238 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 TAS2R50P59544 299 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 YBX1P67809 324 aaKnown RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 EXT1Q16394 746 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CCSMST1Q4G0I0 132 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 GARNL3Q5VVW2 1013 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 SLC25A25Q6KCM7 469 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 OR8K1Q8NGG5 319 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 OR6P1Q8NGX9 317 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 RND1Q92730 232 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 HDAC10Q969S8 669 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CYTH2Q99418 400 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 PLCD4Q9BRC7 762 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 CXXC4Q9H2H0 198 aa13.15□□□□□ -0.3
ACTN1-219ENST00000556432 DNAJB12Q9NXW2 375 aaKnown RBP13.15□□□□□ -0.3
ACTN1-219ENST00000556432 LRFN1Q9P244 771 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms