RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TFF3Q07654 80 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 LAPTM5Q13571 262 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 LONRF2Q1L5Z9 754 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 HSP90AA4PQ58FG1 418 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 FNBP1LQ5T0N5 605 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 ATG9BQ674R7 924 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 GK5Q6ZS86 529 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 SHISA6Q6ZSJ9 500 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 COX15Q7KZN9 410 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 NDUFAF7Q7L592 441 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 TRIM73Q86UV7 250 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 AMIGO1Q86WK6 493 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 DOLPP1Q86YN1 238 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 CFAP206Q8IYR0 622 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 EID3Q8N140 333 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 SIRT6Q8N6T7 355 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 DDHD1Q8NEL9 900 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 LILRB4Q8NHJ6 448 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 DENND1AQ8TEH3 1009 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 HSPH1Q92598 858 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 DLG3Q92796 817 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 DACT3Q96B18 629 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 LINC00615Q96LM1 132 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 FERD3LQ96RJ6 166 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 SRPK1Q96SB4 655 aaKnown RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 MESP1Q9BRJ9 268 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 CCM2Q9BSQ5 444 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 PCDH18Q9HCL0 1135 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 IRAK4Q9NWZ3 460 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 TAS2R14Q9NYV8 317 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 UBP1Q9NZI7 540 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 PLCL2Q9UPR0 1127 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 LUC7L2Q9Y383 392 aaKnown RBP6.53□□□□□ -1.36
ATXN3-236ENST00000556220 PCM1Q15154 2024 aa6.53□□□□□ -1.36
ATXN3-236ENST00000556220 NSG1A0A0A6YYJ2 146 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 OR5H15A6NDH6 313 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 NPIPA5E9PKD4 350 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 FAM227AF5H4B4 570 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 MAP2K7O14733 419 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 EPHB6O15197 1021 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 PROM1O43490 865 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 MFSD11O43934 449 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 CTAG2O75638 210 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 TOXO94900 526 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF205O95201 554 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 C8BP07358 591 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ADSLP30566 484 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 HMGCLP35914 325 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 NSG1P42857 185 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF75DP51815 510 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 OLIG2Q13516 323 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 STX1AQ16623 288 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ZNF766Q5HY98 468 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 GPRC6AQ5T6X5 926 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ZDHHC20Q5W0Z9 365 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 TXNRD3NBQ6F5E7 133 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 HIBCHQ6NVY1 386 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 SARM1Q6SZW1 724 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 CLEC9AQ6UXN8 241 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 DET1Q7L5Y6 550 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 LILRA3Q8N6C8 439 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 OR52E1Q8NGJ3 308 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 C8orf44Q96CB5 159 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 RBM41Q96IZ5 413 aaKnown RBP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 C18orf12Q96KH6 178 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 OR2A14Q96R47 310 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 CRB3Q9BUF7 120 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 UCK2Q9BZX2 261 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 LIME1Q9H400 295 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 XKR8Q9H6D3 395 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 EURLQ9NYK6 297 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 STMN3Q9NZ72 180 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATXN3-236ENST00000556220 IL1RAPL1Q9NZN1 696 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 CTSFQ9UBX1 484 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 PPT2Q9UMR5 302 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 NPIPA1Q9UND3 350 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 EDARQ9UNE0 448 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 PLEKHA6Q9Y2H5 1048 aa6.52□□□□□ -1.37
ATXN3-236ENST00000556220 A0A0J9YY10 115 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 NKX2-6A6NCS4 301 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 ASPDHA6ND91 283 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 TMCO5BA8MYB1 307 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 IFRD1O00458 451 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-236ENST00000556220 DSCR3O14972 297 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 TTI1O43156 1089 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 GPR39O43194 453 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 ZNHIT1O43257 154 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 ASNA1O43681 348 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 TRIM13O60858 407 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 TSPAN12O95859 305 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 HEXAP06865 529 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 COX6A1P12074 109 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 TCF4P15884 667 aa6.51□□□□□ -1.37
ATXN3-236ENST00000556220 ABOP16442 354 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms