RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CTSFQ9UBX1 484 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 C3orf18Q9UK00 162 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 NEU2Q9Y3R4 380 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 PCDHGB6Q9Y5F9 930 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 DOPEY1Q5JWR5 2465 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 PCSK5Q92824 1860 aa7.41□□□□□ -1.22
PTCSC3-201ENST00000556013 NSG1A0A0A6YYJ2 146 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 IGKV1-8A0A0C4DH67 115 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 TCRBV7S3A2A0A539 114 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CTAGE9A4FU28 777 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 IDSB3KWA1 339 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SLC16A5O15375 505 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 FOXS1O43638 330 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 KIF5CO60282 957 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 WFS1O76024 890 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 KLHL18O94889 574 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 MED26O95402 600 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 NSA2O95478 260 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 TTC4O95801 387 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SLC16A8O95907 504 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 EIF2S1P05198 315 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 ANXA5P08758 320 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 STSP08842 583 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 PRR35P0CG20 571 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 COX6A1P12074 109 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 FBLP22087 321 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CCND1P24385 295 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 PSMB5P28074 263 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SOX11P35716 441 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 COILP38432 576 aaPredicted RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 MAGEA3P43357 314 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 AVPR1BP47901 424 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 RPS15AP62244 130 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 Q0VFX4 171 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CDC16Q13042 620 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 GPS1Q13098 491 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF324BQ6AW86 544 aaPredicted RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 NIPAL1Q6NVV3 410 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CASC4Q6P4E1 433 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SUSD1Q6UWL2 747 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CES3Q6UWW8 571 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 GALNT7Q86SF2 657 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 LAPTM4BQ86VI4 370 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CSNK1A1LQ8N752 337 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 BCORP1Q8N888 145 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 GRK7Q8WTQ7 553 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SIGLEC10Q96LC7 697 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CCDC138Q96M89 665 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SERPINB12Q96P63 405 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SLX1AQ9BQ83 275 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 NAT9Q9BTE0 207 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 TUBB6Q9BUF5 446 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 SARGQ9BW04 601 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 DRC3Q9H069 523 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF700Q9H0M5 742 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CLK4Q9HAZ1 481 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 LZTFL1Q9NQ48 299 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 GALPQ9UBC7 116 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 TRPC4Q9UBN4 977 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CIDEBQ9UHD4 219 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 TEKT2Q9UIF3 430 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 RUVBL1Q9Y265 456 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 MED16Q9Y2X0 877 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 MRPS2Q9Y399 296 aaKnown RBP7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 MAU2Q9Y6X3 613 aa7.4□□□□□ -1.22
PTCSC3-201ENST00000556013 CACNA1DQ01668 2161 aa7.4□□□□□ -1.23
PTCSC3-201ENST00000556013 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 IGHV1-45A0A0A0MS14 117 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 GOLGA8KD6RF30 607 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 GOLGA8TH3BQL2 631 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 SMAPO00193 183 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 CES2O00748 559 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 AVILO75366 819 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 CRYABP02511 175 aaKnown RBP7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 C8GP07360 202 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 HEXBP07686 556 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 FNTAP49354 379 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 RGS4P49798 205 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 AGTR2P50052 363 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 TNFSF10P50591 281 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 FOXL2P58012 376 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 ARG2P78540 354 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 MEF2AQ02078 507 aaPredicted RBP7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 CTBP1Q13363 440 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 PTK6Q13882 451 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 HIF1AQ16665 826 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 LONRF1Q17RB8 773 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 ZNF549Q6P9A3 640 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 CCDC137Q6PK04 289 aaKnown RBP7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 FAM180AQ6UWF9 173 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 KIAA0408Q6ZU52 694 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 LURAP1LQ8IV03 231 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 TMEM151BQ8IW70 566 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 AMER3Q8N944 861 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 GPATCH11Q8N954 259 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 NAT8LQ8N9F0 302 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 CAMKVQ8NCB2 501 aa7.39□□□□□ -1.23
PTCSC3-201ENST00000556013 PLPP5Q8NEB5 264 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms