RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 C3orf18Q9UK00 162 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 FBXO5Q9UKT4 447 aa12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 NOVA2Q9UNW9 492 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 RUVBL1Q9Y265 456 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-221ENST00000555883 KCNE1BA0A087WTH5 132 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 GOLGA6L10A0A0M3HER8 536 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 MASP2O00187 686 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 SMAPO00193 183 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 TTC4O95801 387 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 Q0VFX4 171 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 SP140Q13342 867 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 MFAP5Q13361 173 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 PTK6Q13882 451 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 ZNF169Q14929 603 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 TLR1Q15399 786 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 NR6A1Q15406 480 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 UGT3A1Q6NUS8 523 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 ISLR2Q6UXK2 745 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 RIPOR1Q6ZS17 1223 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 SHISA6Q6ZSJ9 500 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 NDUFAF7Q7L592 441 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 GALNT7Q86SF2 657 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 AGGF1Q8N302 714 aaeCLIP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 METTL27Q8N6F8 245 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 AMER3Q8N944 861 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 ST6GALNAC3Q8NDV1 305 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 SLCO2A1Q92959 643 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 MS4A14Q96JA4 679 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 AARSD1Q9BTE6 412 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 FAM129AQ9BZQ8 928 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 DRC3Q9H069 523 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 PCBD2Q9H0N5 130 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 FBXO6Q9NRD1 293 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 C20orf96Q9NUD7 363 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 MAP10Q9P2G4 905 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 DOPEY1Q5JWR5 2465 aa12.08□□□□□ -0.48
HNRNPC-221ENST00000555883 ANKRD12Q6UB98 2062 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 NSG1A0A0A6YYJ2 146 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 ANKUB1A6NFN9 424 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 IDSB3KWA1 339 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 H0YIG0 161 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 GOLGA8MH3BSY2 632 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 FOXS1O43638 330 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 LDLRP01130 860 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 COX6A1P12074 109 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 PGAM1P18669 254 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 CCND1P24385 295 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 CXCR2P25025 360 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 IMPA1P29218 277 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 SOX11P35716 441 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 CUL1Q13616 776 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 INAQ16352 499 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 NDUFA9Q16795 377 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 HKDC1Q2TB90 917 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 VWA2Q5GFL6 755 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 KIAA0408Q6ZU52 694 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 CNTN4Q8IWV2 1026 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 KBTBD2Q8IY47 623 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 DTWD1Q8N5C7 304 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 C2CD4AQ8NCU7 369 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 DNAJB14Q8TBM8 379 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 THAP11Q96EK4 314 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 OSBPL9Q96SU4 736 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 GPR21Q99679 349 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 TEX15Q9BXT5 2789 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 SYNPO2LQ9H987 977 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 TMEM184CQ9NVA4 438 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 RIC8BQ9NVN3 520 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 TRPC4Q9UBN4 977 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 PCYOX1Q9UHG3 505 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 SLC5A6Q9Y289 635 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 MAD1L1Q9Y6D9 718 aa12.07□□□□□ -0.48
HNRNPC-221ENST00000555883 IGHV1-45A0A0A0MS14 117 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 SLC16A5O15375 505 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ALOX12BO75342 701 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 HAUS5O94927 633 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 SERPINA7P05543 415 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 C8GP07360 202 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ANXA5P08758 320 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 PRR35P0CG20 571 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ICAM2P13598 275 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 GLRBP48167 497 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 RGS4P49798 205 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 TERF1P54274 439 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 EMP2P54851 167 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 RPS15AP62244 130 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 ELOAQ14241 798 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 CRYMQ14894 314 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 HIF1AQ16665 826 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 C4orf17Q53FE4 359 aa12.06□□□□□ -0.48
HNRNPC-221ENST00000555883 HSP90AA5PQ58FG0 334 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms