RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 UGDHO60701 494 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 PRAMEF10O60809 474 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 TRIM13O60858 407 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 ADRB1P08588 477 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 FOLR1P15328 257 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 EPORP19235 508 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 CASP2P42575 452 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 SERPINB4P48594 390 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 RAB15P59190 212 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
CHD8-208ENST00000555301 SH3BP2P78314 561 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 IRF8Q02556 426 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 FOXM1Q08050 763 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 TUBB3Q13509 450 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 LAPTM5Q13571 262 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 IL11RAQ14626 422 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 KCNAB1Q14722 419 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 UNC50Q53HI1 259 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 XKR6Q5GH73 641 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 C3orf38Q5JPI3 329 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 PAGE2BQ5JRK9 111 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 RNF44Q7L0R7 432 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 C10orf107Q8IVU9 208 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 BMPERQ8N8U9 685 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 OR8K5Q8NH50 307 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 ZNF483Q8TF39 744 aaPredicted RBP13.7□□□□□ -0.22
CHD8-208ENST00000555301 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 THAP11Q96EK4 314 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 WDR34Q96EX3 536 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 PTCD3Q96EY7 689 aaKnown RBP13.7□□□□□ -0.22
CHD8-208ENST00000555301 OR6C1Q96RD1 312 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 SELENOSQ9BQE4 189 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 AIF1LQ9BQI0 150 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 EFCAB11Q9BUY7 163 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 SARGQ9BW04 601 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 NRSN2Q9GZP1 204 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 PITHD1Q9GZP4 211 aaPredicted RBP13.7□□□□□ -0.22
CHD8-208ENST00000555301 NOL11Q9H8H0 719 aaKnown RBP13.7□□□□□ -0.22
CHD8-208ENST00000555301 POLR1BQ9H9Y6 1135 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 FBXO8Q9NRD0 319 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 FGF21Q9NSA1 209 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 PILRAQ9UKJ1 303 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 PLCL2Q9UPR0 1127 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 SATB2Q9UPW6 733 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 STK38LQ9Y2H1 464 aa13.7□□□□□ -0.22
CHD8-208ENST00000555301 RP1P56715 2156 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 SPEGQ15772 3267 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 KCNE1BA0A087WTH5 132 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 AGRPO00253 132 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 HAT1O14929 419 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 POLR1CO15160 346 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 BIRC5O15392 142 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 CTSVO60911 334 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 WFS1O76024 890 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 MLYCDO95822 493 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 OTCP00480 354 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 BPGMP07738 259 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 DHRS4L1P0CG22 281 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 FGF3P11487 239 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 CCL4P13236 92 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 HGFP14210 728 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 ALDH3A1P30838 453 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 HPDP32754 393 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 CCNG1P51959 295 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 NAGLUP54802 743 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 REEP5Q00765 189 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 CLCQ05315 142 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 CHIT1Q13231 466 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 MPP2Q14168 576 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 E2F2Q14209 437 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 HIST2H2ACQ16777 129 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 HHATQ5VTY9 493 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 LIPJQ5W064 366 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 HIST2H2AA3Q6FI13 130 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 FBXO42Q6P3S6 717 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 MCATQ8IVS2 390 aaKnown RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 KRT78Q8N1N4 520 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 CCNYL1Q8N7R7 359 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 ANKRD42Q8N9B4 389 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 ZNF501Q96CX3 271 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 MAGEB10Q96LZ2 347 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 ZPBPQ9BS86 351 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 NTMT1Q9BV86 223 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 SCNM1Q9BWG6 230 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 ASPSCR1Q9BZE9 553 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 ACTR8Q9H981 624 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 ZBTB26Q9HCK0 441 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 MED4Q9NPJ6 270 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 SEMA4BQ9NPR2 832 aaPredicted RBP13.69□□□□□ -0.22
CHD8-208ENST00000555301 SLC39A1Q9NY26 324 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 PISDQ9UG56 409 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 SERTAD3Q9UJW9 196 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 KLK13Q9UKR3 277 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 RARRES3Q9UL19 164 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 WASF3Q9UPY6 502 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 NEUROG3Q9Y4Z2 214 aa13.69□□□□□ -0.22
CHD8-208ENST00000555301 A0A0J9YVX5 310 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TRBC2A0A5B9 178 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms