RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 GPN1Q9HCN4 374 aaPredicted RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 CENPMQ9NSP4 180 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 TMOD3Q9NYL9 352 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 KCNN3Q9UGI6 736 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 DNPEPQ9ULA0 475 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 STON1Q9Y6Q2 735 aa4.95□□□□□ -1.62
VRK1-203ENST00000555067 ATXN2Q99700 1313 aaKnown RBP4.95□□□□□ -1.62
VRK1-203ENST00000555067 A0A0G2JPF8 293 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ARHGAP42A6NI28 874 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 HNRNPCL3B7ZW38 293 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 FAM72CH0Y354 149 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 MEIS2O14770 477 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 XRCC3O43542 346 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SSX4O60224 188 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ZIC3O60481 467 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 TSC22D2O75157 780 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ZNF217O75362 1048 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 RFPL2O75678 378 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SERPINB2P05120 415 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ANKRD34CP0C6C1 535 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 HNRNPCL4P0DMR1 293 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 G6PDP11413 515 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CETPP11597 493 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SKILP12757 684 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 KRT5P13647 590 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CD58P19256 250 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 FUT1P19526 365 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 IL4RP24394 825 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SOX6P35712 828 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 PIGAP37287 484 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 MAGEB1P43366 347 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 RGS7P49802 495 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 METAP2P50579 478 aaKnown RBP eCLIP4.94□□□□□ -1.62
VRK1-203ENST00000555067 SRP54P61011 504 aaKnown RBP4.94□□□□□ -1.62
VRK1-203ENST00000555067 RUNX1T1Q06455 604 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CETN1Q12798 172 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CHIT1Q13231 466 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SCGB2A2Q13296 93 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 RIPK1Q13546 671 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ZKSCAN8Q15776 578 aaPredicted RBP4.94□□□□□ -1.62
VRK1-203ENST00000555067 MEP1AQ16819 746 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 FASTKD1Q53R41 847 aaKnown RBP4.94□□□□□ -1.62
VRK1-203ENST00000555067 HERC4Q5GLZ8 1057 aaPredicted RBP4.94□□□□□ -1.62
VRK1-203ENST00000555067 RIPPLY2Q5TAB7 128 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 FAM72AQ5TYM5 149 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 KCTD11Q693B1 232 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CENPPQ6IPU0 288 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 FAM72DQ6L9T8 149 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ARHGAP11AQ6P4F7 1023 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 FAM72BQ86X60 149 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CFAP206Q8IYR0 622 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 OR2AJ1Q8NGZ0 328 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ERGIC1Q969X5 290 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 ORAI1Q96D31 301 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 TMEM19Q96HH6 336 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 OR6C1Q96RD1 312 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CSF3RQ99062 836 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 C16orf70Q9BSU1 422 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 RAB17Q9H0T7 212 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CARD9Q9H257 536 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 NOX4Q9NPH5 578 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SERINC1Q9NRX5 453 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 STK39Q9UEW8 545 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 CDC14AQ9UNH5 594 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 SMC3Q9UQE7 1217 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 B3GALT5Q9Y2C3 310 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 EXOC6BQ9Y2D4 811 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 PADI2Q9Y2J8 665 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 HBS1LQ9Y450 684 aaKnown RBP4.94□□□□□ -1.62
VRK1-203ENST00000555067 MMP24Q9Y5R2 645 aa4.94□□□□□ -1.62
VRK1-203ENST00000555067 A0A1B0GWJ7 208 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TMEM221A6NGB7 291 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 DUXAA6NLW8 204 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 EIF4E1BA6NMX2 242 aaKnown RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 KBTBD13C9JR72 458 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 F8WDY8 70 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 H0YIG0 161 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 BOLA2-SMG1P6H3BVE0 249 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 J3QR06 171 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TSPAN1O60635 241 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 HSF2BPO75031 334 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ATP9AO75110 1047 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ADCY5O95622 1261 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ATP1A1P05023 1023 aaKnown RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 NR1D1P20393 614 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 HRH2P25021 359 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 MPZP25189 248 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 DHPSP49366 369 aaPredicted RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 CCNA1P78396 465 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 BEX3Q00994 111 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 SPP2Q13103 211 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TCTE1Q5JU00 501 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 CCNI2Q6ZMN8 369 aaPredicted RBP4.93□□□□□ -1.62
VRK1-203ENST00000555067 MACC1Q6ZN28 852 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TPRG1Q6ZUI0 275 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 ZNF611Q8N823 705 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 SCCPDHQ8NBX0 429 aa4.93□□□□□ -1.62
VRK1-203ENST00000555067 TMEM185AQ8NFB2 350 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms