RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 MAGEA6P43360 314 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TDGF1P3P51864 188 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 PNLIPRP1P54315 467 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TAP2Q03519 686 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 RELAQ04206 551 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 DSG2Q14126 1118 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 ARHGAP19Q14CB8 494 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 ZRSR2Q15696 482 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 SYT16Q17RD7 645 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 RNF187Q5TA31 235 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 IRAK1BP1Q5VVH5 260 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 ANKRD22Q5VYY1 191 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 NEPROQ6NW34 567 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 ZNF549Q6P9A3 640 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TICAM1Q8IUC6 712 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 OTUD6BQ8N6M0 293 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 PRELID2Q8N945 189 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 PPFIBP2Q8ND30 876 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 GIMAP7Q8NHV1 300 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 ZNF480Q8WV37 535 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 MVB12AQ96EY5 273 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 CABS1Q96KC9 395 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TGIF2Q9GZN2 237 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 PTGFRNQ9P2B2 879 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TRPC4Q9UBN4 977 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 MRPS2Q9Y399 296 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 CACNA1CQ13936 2221 aa11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 NCOA6Q14686 2063 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-207ENST00000554677 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 NSG1A0A0A6YYJ2 146 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 GFYI3L273 518 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 ZG16O60844 167 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 USP1O94782 785 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 SLC16A8O95907 504 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 SERPINA7P05543 415 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 RPA3P35244 121 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 TNFSF10P50591 281 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 TERF1P54274 439 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 EEF1A2Q05639 463 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 NAA25Q14CX7 972 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 PCOLCEQ15113 449 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 TRIP13Q15645 432 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 GARNL3Q5VVW2 1013 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 ICE2Q659A1 982 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 FAAH2Q6GMR7 532 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 TMEM205Q6UW68 189 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 ZNF662Q6ZS27 426 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 NEK10Q6ZWH5 1172 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 GSTA5Q7RTV2 222 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 AGGF1Q8N302 714 aaeCLIP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 SIRT6Q8N6T7 355 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 CSNK1A1LQ8N752 337 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 FBXO15Q8NCQ5 510 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 ASB11Q8WXH4 323 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 MMABQ96EY8 250 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 CDC14AQ9UNH5 594 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 FBN2P35556 2912 aa11.6□□□□□ -0.55
MTHFD1-207ENST00000554677 PDZD2O15018 2839 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 A0A0A6YYC8 382 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 ZCWPW2A0A1B0GU75 182 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 I3L1I5 382 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 PCDH17O14917 1159 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 HAT1O14929 419 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 PHF2O75151 1096 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 JRKO75564 520 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 WISP2O76076 250 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 BMP10O95393 424 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 ERVK-10P10266 1014 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 ITGAMP11215 1152 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 CXCR5P32302 372 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 HSD17B2P37059 387 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 SKIV2L2P42285 1042 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 CUL1Q13616 776 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 FAM53BQ14153 422 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 ARMC3Q5W041 872 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 TTC27Q6P3X3 843 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 PLD3Q8IV08 490 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 DENND6AQ8IWF6 608 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 BCORP1Q8N888 145 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 RELTQ969Z4 430 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 YIPF2Q9BWQ6 316 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 ZNF700Q9H0M5 742 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 MKKSQ9NPJ1 570 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 OLAHQ9NV23 265 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 INTS10Q9NVR2 710 aaKnown RBP11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 KLHL42Q9P2K6 505 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 PCYOX1Q9UHG3 505 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 DHRS7Q9Y394 339 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 NEU2Q9Y3R4 380 aa11.59□□□□□ -0.55
MTHFD1-207ENST00000554677 TRAV17A0A0B4J275 112 aa11.58□□□□□ -0.56
MTHFD1-207ENST00000554677 FAM237BA0A1B0GVD1 139 aa11.58□□□□□ -0.56
MTHFD1-207ENST00000554677 H7BY64 318 aa11.58□□□□□ -0.56
MTHFD1-207ENST00000554677 CEP104O60308 925 aa11.58□□□□□ -0.56
MTHFD1-207ENST00000554677 VPS26AO75436 327 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms