RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SLC37A2Q8TED4 501 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 MUL1Q969V5 352 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM125Q96AQ2 219 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ECHDC3Q96DC8 303 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SNRNP40Q96DI7 357 aaKnown RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 TBC1D31Q96DN5 1066 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 NUS1Q96E22 293 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 C19orf60Q96EN9 201 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 RNF31Q96EP0 1072 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 BOD1Q96IK1 185 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 C9orf72Q96LT7 481 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 COQ10AQ96MF6 247 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CFAP57Q96MR6 1250 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 GSDMAQ96QA5 445 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 HERPUD2Q9BSE4 406 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PTDSS2Q9BVG9 487 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ALOXE3Q9BYJ1 711 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ING2Q9H160 280 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PDCL3Q9H2J4 239 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SERHL2Q9H4I8 314 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ATP13A3Q9H7F0 1226 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CXorf36Q9H7Y0 433 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 RCOR3Q9P2K3 495 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 LHX3Q9UBR4 397 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 UBA2Q9UBT2 640 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 C2CD3Q4AC94 2353 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 UNC13CQ8NB66 2214 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 TP53BP1Q12888 1972 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 A0A1W2PQ67 120 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ARGFXA6NJG6 315 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 OR5K4A6NMS3 321 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 F5H697 171 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 GOLGA8SH3BPF8 625 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 TRAFD1O14545 582 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 LRRTM2O43300 516 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 KRT86O43790 486 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 RRP9O43818 475 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 CREB3O43889 395 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 C9P02748 559 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 SLC2A4P14672 509 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 TPH1P17752 444 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 GATA3P23771 443 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PTPN4P29074 926 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 CDH5P33151 784 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PPP1R2P41236 205 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 MAPK9P45984 424 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ITGA8P53708 1063 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 RPS7P62081 194 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 KRTAP1-1Q07627 177 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 NFATC2Q13469 925 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PNOCQ13519 176 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 KCNAB1Q14722 419 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 HLXQ14774 488 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 SMN1Q16637 294 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ZNF750Q32MQ0 723 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PTCHD3Q3KNS1 767 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PYCR3Q53H96 274 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 CYB5D1Q6P9G0 228 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 GJB7Q6PEY0 223 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 KIAA0408Q6ZU52 694 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 MICALCLQ6ZW33 695 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PHLDB2Q86SQ0 1253 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 GALNT13Q8IUC8 556 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 IQCKQ8N0W5 287 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 UMODL1-AS1Q8N2C9 162 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 NKAPQ8N5F7 415 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 RBMXL3Q8N7X1 1067 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ANKRD42Q8N9B4 389 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 MSANTD4Q8NCY6 345 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 BEND2Q8NDZ0 799 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 CPEB3Q8NE35 698 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 CT55Q8WUE5 264 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 SHC3Q92529 594 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ELMO2Q96JJ3 720 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 FCRL4Q96PJ5 515 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 OR2M4Q96R27 311 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 OR6C1Q96RD1 312 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 BRD8Q9H0E9 1235 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ACTL8Q9H568 366 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 UNKLQ9H9P5 680 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 PDE7BQ9NP56 450 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 HEYLQ9NQ87 328 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ASF1BQ9NVP2 202 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 LUZP4Q9P127 313 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 C5AR2Q9P296 337 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 LNPEPQ9UIQ6 1025 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 NDRG4Q9ULP0 352 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 FARSAQ9Y285 508 aaKnown RBP4.75□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM98Q9Y2Y6 226 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 NOX1Q9Y5S8 564 aa4.75□□□□□ -1.65
ATXN3-228ENST00000554592 ITPR2Q14571 2701 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 FBN2P35556 2912 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 SDK2Q58EX2 2172 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 KIR2DS5A0A0G2JLQ3 304 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 A0A0G2JNG1 304 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 BICDL2A1A5D9 508 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 J3KR12 359 aa4.74□□□□□ -1.65
ATXN3-228ENST00000554592 KIR2DS3K7RE56 304 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms