RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PCYT1BQ9Y5K3 369 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 PRSS21Q9Y6M0 314 aa6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ARHGEF17Q96PE2 2063 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-212ENST00000554486 ANKRD12Q6UB98 2062 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TMEM202A6NGA9 273 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 SMIM23A6NLE4 172 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MEI4A8MW99 385 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 PRMT5O14744 637 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 FPGTO14772 594 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RASGRF2O14827 1237 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 WNT1P04628 370 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 INHBAP08476 426 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ATP1B2P14415 290 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF7P17097 686 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF8P17098 575 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RPS3P23396 243 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 FMO4P31512 558 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 AKT1P31749 480 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RPS19P39019 145 aaKnown RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MSH2P43246 934 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 SLCO1A2P46721 670 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 CD151P48509 253 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 POLD2P49005 469 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 GZMKP49863 264 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 PGGT1BP53609 377 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 CTSCP53634 463 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 LIMK2P53671 638 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ADARP55265 1226 aaKnown RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 EIF3BP55884 814 aaKnown RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 KIAA1024LP59773 190 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TIAL1Q01085 375 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 IFFO1Q0D2I5 559 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TMEM115Q12893 351 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 BMPR2Q13873 1038 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 GTF2H3Q13889 308 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 PDE1CQ14123 709 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ICAM4Q14773 271 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 NFATC4Q14934 902 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MLC1Q15049 377 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RASA2Q15283 850 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 CTSL3PQ5NE16 218 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RBM20Q5T481 1227 aaKnown RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 KCTD16Q68DU8 428 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 LAYNQ6UX15 382 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MACC1Q6ZN28 852 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 Q6ZSR6 202 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 DET1Q7L5Y6 550 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RBFAQ8N0V3 343 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 CLDN19Q8N6F1 224 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RASGEF1AQ8N9B8 481 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 GABPB2Q8TAK5 448 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 GDAP1Q8TB36 358 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 Q8TCH9 128 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 LKAAEAR1Q8TD35 194 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ATXN7L3BQ96GX2 97 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 VPS39Q96JC1 886 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ZC3H10Q96K80 434 aaKnown RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 LRGUKQ96M69 825 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TAAR9Q96RI9 348 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 NDNQ99608 321 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 GPR22Q99680 433 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 RBBP8Q99708 897 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 LRFN3Q9BTN0 628 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ROPN1BQ9BZX4 212 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 OR2AG1Q9H205 316 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 VIPAS39Q9H9C1 493 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 PPCSQ9HAB8 311 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ROPN1Q9HAT0 212 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TM9SF3Q9HD45 589 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 PHPT1Q9NRX4 125 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 NSMCE4AQ9NXX6 385 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 PSMC3IPQ9P2W1 217 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 ATXN10Q9UBB4 475 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 LGALS13Q9UHV8 139 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 SLC17A4Q9Y2C5 497 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MED16Q9Y2X0 877 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TMEM98Q9Y2Y6 226 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
SCFD1-212ENST00000554486 MUC6Q6W4X9 2439 aa6.16□□□□□ -1.42
SCFD1-212ENST00000554486 TMEM131Q92545 1883 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 RALGAPA1Q6GYQ0 2036 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 A6NNZ2 444 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 IQCF5A8MTL0 148 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 FOXO6A8MYZ6 492 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 TRIM49D1C9J1S8 452 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 CACNB4O00305 520 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-212ENST00000554486 TOR1BO14657 336 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 CHUKO15111 745 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 PFDN6O15212 129 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 VEGFDO43915 354 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 CDH16O75309 829 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 NIPSNAP2O75323 286 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 IVLP07476 585 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 ITGA2BP08514 1039 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 SNRPAP09012 282 aaKnown RBP6.15□□□□□ -1.42
SCFD1-212ENST00000554486 THEGLP0DJG4 465 aa6.15□□□□□ -1.42
SCFD1-212ENST00000554486 PKMP14618 531 aaKnown RBP6.15□□□□□ -1.42
SCFD1-212ENST00000554486 MSH3P20585 1137 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms