RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PSAT1Q9Y617 370 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 MYO18BQ8IUG5 2567 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 MDC1Q14676 2089 aaKnown RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 ANKRD12Q6UB98 2062 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 A0A0J9YVX5 310 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 PABPN1LA6NDY0 278 aaKnown RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 DSCR3O14972 297 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 NRP2O60462 931 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 GSTA2P09210 222 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 HIST1H2AGP0C0S8 130 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 EZRP15311 586 aaKnown RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 ZNF37AP17032 561 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 HIST1H2ADP20671 130 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 CCND1P24385 295 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 AP1S2P56377 157 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 VSX2P58304 361 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 TBPL1P62380 186 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 NFKB2Q00653 900 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 RELAQ04206 551 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 NFATC3Q12968 1075 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 FAM214AQ32MH5 1076 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 NKAIN1Q4KMZ8 207 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 THEMIS2Q5TEJ8 643 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 ZNF425Q6IV72 752 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 TTLL10Q6ZVT0 673 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 PAQR7Q86WK9 346 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 RAB43Q86YS6 212 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 SPNS2Q8IVW8 549 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 APLFQ8IW19 511 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 ARFGAP2Q8N6H7 521 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 PPFIBP2Q8ND30 876 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 C9orf43Q8TAL5 461 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 ADAMTS17Q8TE56 1095 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 FKBP10Q96AY3 582 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 HIST1H2AHQ96KK5 128 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 OLFM1Q99784 485 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 HIST1H2AJQ99878 128 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 H2AFJQ9BTM1 129 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 RHOJQ9H4E5 214 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 STOX2Q9P2F5 926 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 IFT80Q9P2H3 777 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-211ENST00000554310 ADAMTS6Q9UKP5 1117 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 PDE10AQ9Y233 779 aa12.5□□□□□ -0.41
SHMT2-211ENST00000554310 IGKV1-8A0A0C4DH67 115 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 FAM95CA0A1B0GW59 222 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 RIPK2O43353 540 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 ONECUT2O95948 504 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 ENO2P09104 434 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-211ENST00000554310 PIM1P11309 404 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-211ENST00000554310 NR1D1P20393 614 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 HRH2P25021 359 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 FOLR3P41439 243 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 EMP3P54852 163 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 YBX1P67809 324 aaKnown RBP12.49□□□□□ -0.41
SHMT2-211ENST00000554310 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 PHKG1Q16816 387 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 PRAMEF13Q5VWM6 474 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
SHMT2-211ENST00000554310 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 ZNF605Q86T29 641 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 OR2Y1Q8NGV0 311 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 PDLIM5Q96HC4 596 aaKnown RBP12.49□□□□□ -0.41
SHMT2-211ENST00000554310 VPS39Q96JC1 886 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 IP6K3Q96PC2 410 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 MCMBPQ9BTE3 642 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 POPDC3Q9HBV1 291 aa12.49□□□□□ -0.41
SHMT2-211ENST00000554310 HEMK1Q9Y5R4 338 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-211ENST00000554310 NUP210LQ5VU65 1888 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 TCRBV9S1A1TA0A576 114 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 KLF7O75840 302 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ITGAXP20702 1163 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ALAS2P22557 587 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 SSTR1P30872 391 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 SLC29A2Q14542 456 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 SLC9A5Q14940 896 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 MUM1Q2TAK8 710 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 MLIPQ5VWP3 458 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 AGTRAPQ6RW13 159 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 CYS1Q717R9 158 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ADCK2Q7Z695 626 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 NKAPQ8N5F7 415 aaKnown RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ATL1Q8WXF7 558 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 RERGQ96A58 199 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 TLCD1Q96CP7 247 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 PGM2Q96G03 612 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ABHD17AQ96GS6 310 aa12.48□□□□□ -0.41
SHMT2-211ENST00000554310 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-211ENST00000554310 SLC26A1Q9H2B4 701 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms