RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PIPSLA2A3N6 862 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 POLR3GO15318 223 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 P2RX6O15547 441 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CCNT2O60583 730 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ITGAXP20702 1163 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 GNGT1P63211 74 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CCL7P80098 99 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CLPPQ16740 277 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 INAVAQ3KP66 663 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SLC9B1Q4ZJI4 515 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CAPN13Q6MZZ7 669 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 AFAP1L2Q8N4X5 818 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 C2orf73Q8N5S3 287 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ATOH1Q92858 354 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CXorf40BQ96DE9 158 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CHMP6Q96FZ7 201 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 MIPEPQ99797 713 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 EBF4Q9BQW3 602 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 HAUS8Q9BT25 410 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 EDEM2Q9BV94 578 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ACPTQ9BZG2 426 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 IQCGQ9H095 443 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 AKAP13Q12802 2813 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SCN3AQ9NY46 2000 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 FOXE1O00358 373 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 MANBAO00462 879 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ANKRD28O15084 1053 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SUPT7LO94864 414 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 PDYNP01213 254 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 VIPP01282 170 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ALDOCP09972 364 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 UROSP10746 265 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ST6GAL1P15907 406 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 MAP4P27816 1152 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SCTRP47872 440 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 RPL14P50914 215 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 GPLD1P80108 840 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ABATP80404 500 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ZNF33BQ06732 778 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 GPRIN3Q6ZVF9 776 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 TRIM73Q86UV7 250 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 PIWIL2Q8TC59 973 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 QRFPRQ96P65 431 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SLC6A16Q9GZN6 736 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 PCBD2Q9H0N5 130 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SEMA6CQ9H3T2 930 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 EPB41L1Q9H4G0 881 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 NEUROG3Q9Y4Z2 214 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 PCDHGA4Q9Y5G9 962 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 LAMA5O15230 3695 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 A0A0J9YY10 115 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 TRBC2A0A5B9 178 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 GMNCA6NCL1 334 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 KIF1CO43896 1103 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SNX3O60493 162 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 OTCP00480 354 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 HIST1H2AGP0C0S8 130 aaPredicted RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 EPB42P16452 691 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 HIST1H2ADP20671 130 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 IDH3AP50213 366 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 PRKAA1Q13131 559 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ATG16L1Q676U5 607 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 DCBLD1Q8N8Z6 715 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 MFSD9Q8NBP5 474 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 OR7G3Q8NG95 312 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 OR6C4Q8NGE1 309 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 IFI44Q8TCB0 444 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 LCN9Q8WX39 176 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 HIST1H2AHQ96KK5 128 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 TMEM74Q96NL1 305 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 HIST1H2AJQ99878 128 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 CCDC3Q9BQI4 270 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 NUDT22Q9BRQ3 303 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 H2AFJQ9BTM1 129 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 SRMSQ9H3Y6 488 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ACTL8Q9H568 366 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 BRF2Q9HAW0 419 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 TMEM184CQ9NVA4 438 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 ASIC5Q9NY37 505 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 KLHL14Q9P2G3 628 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 EXO1Q9UQ84 846 aaKnown RBP6.48□□□□□ -1.37
LINC00517-202ENST00000554257 STK38LQ9Y2H1 464 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 TRAF6Q9Y4K3 522 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 USH1CQ9Y6N9 552 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 AP1M2Q9Y6Q5 423 aa6.48□□□□□ -1.37
LINC00517-202ENST00000554257 IGHV5-10-1A0A0J9YXX1 117 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 ZNF839A8K0R7 811 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 C2orf74A8MZ97 194 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 TOX3O15405 576 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CLDN9O95484 217 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 PROS1P07225 676 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CAPN1P07384 714 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 ACPPP15309 386 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 POLR2CP19387 275 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 GRK6P43250 576 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms