RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 DLL1O00548 723 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 UBDO15205 165 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ZW10O43264 779 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 KLHL41O60662 606 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 UBXN7O94888 489 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 RETP07949 1114 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 LINC00032P0C843 101 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 GIMD1P0DJR0 217 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ACPPP15309 386 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 PNLIPP16233 465 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 GLB1P16278 677 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 LBPP18428 481 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 VARSP26640 1264 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 PSMB5P28074 263 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 GPR3P46089 330 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 MRPL19P49406 292 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 HTR6P50406 440 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ATP4BP51164 291 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 MAZP56270 477 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 CSNK1G2P78368 415 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 SF3A3Q12874 501 aaKnown RBP eCLIP7.36□□□□□ -1.23
TDP1-209ENST00000554180 BNIP3Q12983 259 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ABRAXAS2Q15018 415 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 SF1Q15637 639 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 ZSCAN26Q16670 478 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 IMPG1Q17R60 797 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 INAVAQ3KP66 663 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 TCHHL1Q5QJ38 904 aaPredicted RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 PLA2G2CQ5R387 149 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CATSPEREQ5SY80 951 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ZNF425Q6IV72 752 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ARMC6Q6NXE6 501 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 SPESP1Q6UW49 350 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 TMIGD1Q6UXZ0 262 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CHSY3Q70JA7 882 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CLNKQ7Z7G1 428 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 MTDHQ86UE4 582 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 ALYREFQ86V81 257 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 SFTPA2Q8IWL1 248 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 SLC35F3Q8IY50 421 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CARFQ8N187 725 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 C2orf73Q8N5S3 287 aaPredicted RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 FAM181AQ8N9Y4 354 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 KYQ8NBH2 561 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 FLVCR1-AS1Q8TAF5 88 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 TUBGCP3Q96CW5 907 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ERP27Q96DN0 273 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 C3orf30Q96M34 536 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 OR2A14Q96R47 310 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 COL25A1Q9BXS0 654 aaPredicted RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 NMUR2Q9GZQ4 415 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 RAB33BQ9H082 229 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 RHBGQ9H310 441 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CAAP1Q9H8G2 361 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ABCF3Q9NUQ8 709 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 TMEM45AQ9NWC5 275 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CUEDC1Q9NWM3 386 aaPredicted RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 NMRK1Q9NWW6 199 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ASIC5Q9NY37 505 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 SPHK1Q9NYA1 384 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ACTR10Q9NZ32 417 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 EPHA6Q9UF33 1036 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ZFP69BQ9UJL9 534 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 POMT2Q9UKY4 750 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 ZNF490Q9ULM2 529 aaPredicted RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 SNX7Q9UNH6 387 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 TMED5Q9Y3A6 229 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 CCL27Q9Y4X3 112 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 PCDHGB2Q9Y5G2 931 aa7.36□□□□□ -1.23
TDP1-209ENST00000554180 GOLGA4Q13439 2230 aaKnown RBP7.36□□□□□ -1.23
TDP1-209ENST00000554180 PCDH15Q96QU1 1955 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 MUC6Q6W4X9 2439 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 IGKV1-8A0A0C4DH67 115 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 A0A0J9YY10 115 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ATP6AP2A0A1C7CYW4 349 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 TRBC2A0A5B9 178 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 GSAPA4D1B5 854 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 OR2A25A4D2G3 310 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 CCT8L1PA6NM43 557 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 RHPN2P1A8MT19 583 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 PATE3B3GLJ2 98 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 H7BY64 318 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 FCHO1O14526 889 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 LSM1O15116 133 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 PPM1DO15297 605 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 TNFSF14O43557 240 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ATP6AP2O75787 350 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 SEMA3DO95025 777 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 PDYNP01213 254 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 PROS1P07225 676 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 IDO1P14902 403 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 EZRP15311 586 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 UGT2B7P16662 529 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 POLR2CP19387 275 aaPredicted RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 AHRP35869 848 aa7.35□□□□□ -1.23
TDP1-209ENST00000554180 ATXN3P54252 364 aaPredicted RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 RPS15AP62244 130 aaKnown RBP7.35□□□□□ -1.23
TDP1-209ENST00000554180 ERVK-8P63133 956 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms