RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 H7BY64 318 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 UBFD1O14562 309 aaKnown RBP17.31■□□□□ 0.36
PSEN1-208ENST00000553719 CTSVO60911 334 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 KATNA1O75449 491 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 RASSF9O75901 435 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 MSL3P1P0C860 447 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 CHN1P15882 459 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 VARSP26640 1264 aaKnown RBP17.31■□□□□ 0.36
PSEN1-208ENST00000553719 CCR8P51685 355 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 HSD11B2P80365 405 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 REEP5Q00765 189 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 ASPHQ12797 758 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 LCP2Q13094 533 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 PUM1Q14671 1186 aaKnown RBP eCLIP17.31■□□□□ 0.36
PSEN1-208ENST00000553719 SNAP47Q5SQN1 464 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 HHATQ5VTY9 493 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 ZCCHC23Q6ZST2 131 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 TMPRSS12Q86WS5 348 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 LSMEM2Q8N112 164 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 L3MBTL4Q8NA19 623 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 TCTN2Q96GX1 697 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 LIN37Q96GY3 246 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-208ENST00000553719 PRAP1Q96NZ9 151 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 DEPDC7Q96QD5 511 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 ZNF382Q96SR6 550 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 SEMA4BQ9NPR2 832 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-208ENST00000553719 ENAMQ9NRM1 1142 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 GEMIN8Q9NWZ8 242 aaKnown RBP17.31■□□□□ 0.36
PSEN1-208ENST00000553719 FAM53CQ9NYF3 392 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 SNX7Q9UNH6 387 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 CLCA2Q9UQC9 943 aa17.31■□□□□ 0.36
PSEN1-208ENST00000553719 KCNE1BA0A087WTH5 132 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 A8MU76 341 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 HAT1O14929 419 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 HCRTR1O43613 425 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 NPHS1O60500 1241 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 UGDHO60701 494 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 CSO75390 466 aaKnown RBP17.3■□□□□ 0.36
PSEN1-208ENST00000553719 C1GALT1C1LP0DN25 315 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 EZRP15311 586 aaKnown RBP17.3■□□□□ 0.36
PSEN1-208ENST00000553719 SERPINB5P36952 375 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 CCR10P46092 362 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 SEPHS1P49903 392 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 CHIT1Q13231 466 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 DOC2AQ14183 400 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 GGTA1PQ4G0N0 100 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 PHF19Q5T6S3 580 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 DNAJC22Q8N4W6 341 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 CCNYL1Q8N7R7 359 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 BMPERQ8N8U9 685 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 TRPC4APQ8TEL6 797 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 AGAP11Q8TF27 550 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 GRAMD1AQ96CP6 724 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 PTCD3Q96EY7 689 aaKnown RBP17.3■□□□□ 0.36
PSEN1-208ENST00000553719 TRMOQ9BU70 441 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 ANGPTL3Q9Y5C1 460 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 KIF26BQ2KJY2 2108 aa17.3■□□□□ 0.36
PSEN1-208ENST00000553719 MDC1Q14676 2089 aaKnown RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 A0A1W2PNU3 283 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 H3BMH7 237 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 TMX2-CTNND1H3BSU7 103 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 CLGNO14967 610 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 H2AFYO75367 372 aaKnown RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 SERPINE1P05121 402 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 EBLN1P0CF75 366 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 TSPAN8P19075 237 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 BGNP21810 368 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 MEF2AQ02078 507 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 IRF8Q02556 426 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 GALNT1Q10472 559 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 CHI3L2Q15782 390 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 XKR6Q5GH73 641 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 GRHL2Q6ISB3 625 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 LETMD1Q6P1Q0 360 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 FBXO42Q6P3S6 717 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 TMPRSS7Q7RTY8 843 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 ZNF740Q8NDX6 193 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 RAB3IL1Q8TBN0 382 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 PRR11Q96HE9 360 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 CNDP1Q96KN2 507 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 ZNF285Q96NJ3 590 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 EFCAB11Q9BUY7 163 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 PITHD1Q9GZP4 211 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-208ENST00000553719 DRC3Q9H069 523 aa17.29■□□□□ 0.36
PSEN1-208ENST00000553719 KNTC1P50748 2209 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 TRBC2A0A5B9 178 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 MLYCDO95822 493 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 OTCP00480 354 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 CCNG1P51959 295 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 ERVPABLB-1P60509 514 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 RCN2Q14257 317 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 SLBPQ14493 270 aaKnown RBP eCLIP17.28■□□□□ 0.36
PSEN1-208ENST00000553719 KCNAB1Q14722 419 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 LIPJQ5W064 366 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 SYVN1Q86TM6 617 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 PLD3Q8IV08 490 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 LAS2Q8IYD9 372 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 AGBL5Q8NDL9 886 aa17.28■□□□□ 0.36
PSEN1-208ENST00000553719 OR4F6Q8NGB9 312 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms