RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GPR155Q7Z3F1 870 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 THOC6Q86W42 341 aaKnown RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PHACTR4Q8IZ21 702 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CHST14Q8NCH0 376 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 FRS2Q8WU20 508 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 REPS1Q96D71 796 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 COG8Q96MW5 612 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PHF12Q96QT6 1004 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PANX1Q96RD7 426 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 MBOAT4Q96T53 435 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 BCL7BQ9BQE9 202 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PLGRKTQ9HBL7 147 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 TM9SF3Q9HD45 589 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SLC6A13Q9NSD5 602 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 BTNL2Q9UIR0 455 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CDC14AQ9UNH5 594 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CCL26Q9Y258 94 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PCDHGA8Q9Y5G5 932 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 MAGEB17A8MXT2 336 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 M0QX08 132 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 CLIC1O00299 241 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 FPGTO14772 594 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 MRPS14O60783 128 aaKnown RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 GJA1P17302 382 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 XPAP23025 273 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 CXCR4P61073 352 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 KEAP1Q14145 624 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF77Q15935 545 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 ZIK1Q3SY52 487 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 XKR6Q5GH73 641 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 ANXA8L1Q5VT79 327 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF691Q5VV52 312 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 DOK6Q6PKX4 331 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 RFLNAQ6ZTI6 216 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 HSD11B1LQ7Z5J1 315 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 TECPR1Q7Z6L1 1165 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 RBM23Q86U06 439 aaKnown RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 DCP2Q8IU60 420 aaKnown RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 ZDHHC21Q8IVQ6 265 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 OR56A3Q8NH54 315 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 GLYATL1Q969I3 302 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 PYCR2Q96C36 320 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 CCM2Q9BSQ5 444 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 AMBRA1Q9C0C7 1298 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 REXO4Q9GZR2 422 aaKnown RBP12.5□□□□□ -0.41
SHMT2-205ENST00000553474 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 SIRT5Q9NXA8 310 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 BAG5Q9UL15 447 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 NAALAD2Q9Y3Q0 740 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
SHMT2-205ENST00000553474 SLC5A10A0PJK1 596 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 PRAMEF4O60810 478 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SCN2BO60939 215 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 LEFTY1O75610 366 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 TIMP2P16035 220 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ITPKAP23677 461 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ELK4P28324 431 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SHMT2P34897 504 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 CCR2P41597 374 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ISL1P61371 349 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SEMG2Q02383 582 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 UGT8Q16880 541 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 GPR107Q5VW38 600 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 PRAMEF9Q5VWM5 478 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 OR4F3Q6IEY1 312 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 OR2T5Q6IEZ7 315 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 AGTRAPQ6RW13 159 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SERPINA13PQ6UXR4 307 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 TMEM26Q6ZUK4 368 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 Q6ZVL8 140 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 PIWIL3Q7Z3Z3 882 aaKnown RBP12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ADGRD2Q7Z7M1 963 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SLC22A15Q8IZD6 547 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 CHDHQ8NE62 594 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-205ENST00000553474 OR2T29Q8NH02 315 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 WFIKKN2Q8TEU8 576 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SCAMP4Q969E2 229 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 PPP1R14BQ96C90 147 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 THAP11Q96EK4 314 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 INPP5KQ9BT40 448 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ASPSCR1Q9BZE9 553 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ZCCHC2Q9C0B9 1178 aaKnown RBP12.49□□□□□ -0.41
SHMT2-205ENST00000553474 ADNPQ9H2P0 1102 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 TRIT1Q9H3H1 467 aaKnown RBP12.49□□□□□ -0.41
SHMT2-205ENST00000553474 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-205ENST00000553474 STOX2Q9P2F5 926 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-205ENST00000553474 CD84Q9UIB8 345 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 PCDHB11Q9Y5F2 797 aa12.49□□□□□ -0.41
SHMT2-205ENST00000553474 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 KLHL33A6NCF5 533 aa12.48□□□□□ -0.41
SHMT2-205ENST00000553474 ARHGEF33A8MVX0 844 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms