RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GSDMBQ8TAX9 411 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 THAP3Q8WTV1 239 aaPredicted RBP8.6□□□□□ -1.03
SYNE2-209ENST00000553308 CHTF18Q8WVB6 975 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 TMEM121Q9BTD3 319 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 TUBB6Q9BUF5 446 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 VN1R1Q9GZP7 353 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 DRC3Q9H069 523 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 MCCC2Q9HCC0 563 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 ANKRD10Q9NXR5 420 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 SPATA7Q9P0W8 599 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 TEKT2Q9UIF3 430 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 NPIPA1Q9UND3 350 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 NEU2Q9Y3R4 380 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PCDHA13Q9Y5I0 950 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 PCNX1Q96RV3 2341 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 AKAP9Q99996 3911 aa8.6□□□□□ -1.03
SYNE2-209ENST00000553308 DCHS2Q6V1P9 2916 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 AKR1B15C9JRZ8 316 aaPredicted RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 TTI1O43156 1089 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 MAN1A2O60476 641 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 VPS26AO75436 327 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 ZNF189O75820 626 aaPredicted RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 STATHP02808 62 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 HSF1Q00613 529 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 TSTA3Q13630 321 aaPredicted RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 NAA25Q14CX7 972 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 OR1C1Q15619 314 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 AARS2Q5JTZ9 985 aaKnown RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 ACER2Q5QJU3 275 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 TUBA3EQ6PEY2 450 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 PPP1R21Q6ZMI0 780 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 MEX3BQ6ZN04 569 aaKnown RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 PAQR7Q86WK9 346 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 ACBD4Q8NC06 268 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 AGAP11Q8TF27 550 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 FRMD6Q96NE9 622 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 PANX3Q96QZ0 392 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 OR2A5Q96R48 311 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 NPAS2Q99743 824 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 SPOCK3Q9BQ16 436 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 ENKD1Q9H0I2 346 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 P2RY12Q9H244 342 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 GPAMQ9HCL2 828 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 MRPS30Q9NP92 439 aaKnown RBP8.59□□□□□ -1.03
SYNE2-209ENST00000553308 CATSPERZQ9NTU4 200 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 GNPTGQ9UJJ9 305 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 RIMKLBQ9ULI2 386 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 TCAF1Q9Y4C2 921 aa8.59□□□□□ -1.03
SYNE2-209ENST00000553308 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ASPDHA6ND91 283 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 OR2W5A6NFC9 320 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ARHGEF33A8MVX0 844 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 PHF2O75151 1096 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 GAS8O95995 478 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ERGP11308 486 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ABOP16442 354 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ADRA1DP25100 572 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 EEF1DP29692 281 aaKnown RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 RPA3P35244 121 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 PPARGP37231 505 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CD96P40200 585 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CCNFP41002 786 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CETN2P41208 172 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 TBX2Q13207 712 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 KLF1Q13351 362 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 MINDY4Q4G0A6 757 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 KRTCAP3Q53RY4 240 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CTSL3PQ5NE16 218 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 MFSD4BQ5TF39 518 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 GARNL3Q5VVW2 1013 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 PLAG1Q6DJT9 500 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 SPINK14Q6IE38 97 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF425Q6IV72 752 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 H3F3CQ6NXT2 135 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 OTOAQ7RTW8 1153 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 PRSS41Q7RTY9 318 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 GALNTL5Q7Z4T8 443 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CPEB2Q7Z5Q1 589 aaKnown RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CRLF3Q8IUI8 442 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 PLD3Q8IV08 490 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 SIAH3Q8IW03 269 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 CHERPQ8IWX8 916 aaKnown RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 OR9A4Q8NGU2 314 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 SLC35B2Q8TB61 432 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 METTL21AQ8WXB1 218 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 RERGQ96A58 199 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 FAM136AQ96C01 138 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 SCMH1Q96GD3 660 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ZNF354BQ96LW1 612 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 FOPNLQ96NB1 174 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 DMRTA2Q96SC8 542 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 TREX2Q9BQ50 279 aaPredicted RBP8.58□□□□□ -1.04
SYNE2-209ENST00000553308 TRIM51Q9BSJ1 452 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 KCNK13Q9HB14 408 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 ETNK1Q9HBU6 452 aa8.58□□□□□ -1.04
SYNE2-209ENST00000553308 TAC3Q9UHF0 121 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms