RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 CAMK1DQ8IU85 385 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 TBC1D10CQ8IV04 446 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 HSCBQ8IWL3 235 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 CNPY4Q8N129 248 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 FBXO39Q8N4B4 442 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 SLC25A41Q8N5S1 370 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 ARL14EPQ8N8R7 260 aaPredicted RBP3.69□□□□□ -1.82
LIMA1-208ENST00000551691 XXYLT1Q8NBI6 393 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 SLC4A11Q8NBS3 891 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 OR4N2Q8NGD1 307 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 OR8H1Q8NGG4 311 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 CEP76Q8TAP6 659 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 PTPMT1Q8WUK0 201 aaPredicted RBP3.69□□□□□ -1.82
LIMA1-208ENST00000551691 RSPH1Q8WYR4 309 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 SNX21Q969T3 373 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 CPB2Q96IY4 423 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 COQ10AQ96MF6 247 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 DDOQ99489 341 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 EGFL8Q99944 293 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 EFHD1Q9BUP0 239 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 FUT8Q9BYC5 575 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 FAM129AQ9BZQ8 928 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 TKTL2Q9H0I9 626 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 GOLPH3LQ9H4A5 285 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 GAREM1Q9H706 876 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 AAMDCQ9H7C9 122 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 WDR26Q9H7D7 661 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 CD93Q9NPY3 652 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 ABCB8Q9NUT2 735 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 HAO2Q9NYQ3 351 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 UTS2RQ9UKP6 389 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 LAMP3Q9UQV4 416 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 WNT6Q9Y6F9 365 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 CEP192Q8TEP8 1941 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 NEDD4P46934 1319 aa3.69□□□□□ -1.82
LIMA1-208ENST00000551691 MYLKQ15746 1914 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 COL1A2P08123 1366 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TLN1Q9Y490 2541 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TCRBV5S1A1TA0A578 114 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CPED1A4D0V7 1026 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 LRRD1A4D1F6 860 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TMEM202A6NGA9 273 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MAGEB17A8MXT2 336 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 FOXO6A8MYZ6 492 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SGK1O00141 431 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 VCYO14598 125 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MAGEB2O15479 319 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 PRAMEF11O60813 436 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 NEURL1O76050 574 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MT-ND3P03897 115 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MMP2P08253 660 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 UNGP13051 313 aaPredicted RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SRD5A1P18405 259 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TMOD1P28289 359 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TKTP29401 623 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 RYKP34925 604 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 BRCC3P46736 316 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CLK1P49759 484 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 YPEL5P62699 121 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 HSF1Q00613 529 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 IL9RQ01113 521 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 GAD2Q05329 585 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 WASHC5Q12768 1159 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 FOXI1Q12951 378 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 DNAJC3Q13217 504 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 STIM1Q13586 685 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 DLG2Q15700 870 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 HLA-BQ31612 363 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CBWD6Q4V339 395 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 DCAF6Q58WW2 860 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CBWD3Q5JTY5 395 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 GGNBP1Q5YKI7 109 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 FBXO42Q6P3S6 717 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 ZNF449Q6P9G9 518 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CNSTQ6PJW8 725 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 RBPMS2Q6ZRY4 209 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 C11orf57Q6ZUT1 292 aaPredicted RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 LINGO2Q7L985 606 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 OTOAQ7RTW8 1153 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 NOXA1Q86UR1 476 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TMPRSS12Q86WS5 348 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 FAM217AQ8IXS0 508 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 DDIASQ8IXT1 998 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SLC35F3Q8IY50 421 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 ZDHHC23Q8IYP9 409 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SYCP3Q8IZU3 236 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 DSELQ8IZU8 1212 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 RBM15BQ8NDT2 890 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 KRT35Q92764 455 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 KAT2AQ92830 837 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 NXNL1Q96CM4 212 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 NXPE2Q96DL1 559 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 P2RY11Q96G91 374 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 MSANTD3Q96H12 275 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 CNOT6LQ96LI5 555 aaKnown RBP3.68□□□□□ -1.82
LIMA1-208ENST00000551691 NLRP4Q96MN2 994 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 SMC6Q96SB8 1091 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 P2RY13Q9BPV8 354 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 TM2D2Q9BX73 214 aa3.68□□□□□ -1.82
LIMA1-208ENST00000551691 LRRCC1Q9C099 1032 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms