RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, human

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2B1-208	ENST00000551009	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TRIM10	Q9UDY6	481 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CNOT8	Q9UFF9	292 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FBXL2	Q9UKC9	423 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GAB2	Q9UQC2	676 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MRPL11	Q9Y3B7	192 aa	Known RBP	4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TEX264	Q9Y6I9	313 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009		U3KQV3	271 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	NSD2	O96028	1365 aa		4.36	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZCWPW2	A0A1B0GU75	182 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	C13orf42	A0A1B0GVH6	325 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	YDJC	A8MPS7	323 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MAGEB17	A8MXT2	336 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FAM90A26	D6RGX4	464 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	E2F3	O00716	465 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	HS3ST1	O14792	307 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CYTIP	O60759	359 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DAB1	O75553	588 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CRCP	O75575	148 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CELF2	O95319	508 aa	Known RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MOCS3	O95396	460 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PDGFB	P01127	241 aa	Predicted RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	HIST1H2AB	P04908	130 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	AREG	P15514	252 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PFKFB1	P16118	471 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	VCL	P18206	1134 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	HIST1H2AD	P20671	130 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ADAR	P55265	1226 aa	Known RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ISL1	P61371	349 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CDO1	Q16878	200 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	RARS2	Q5T160	578 aa	Known RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	LCN10	Q6JVE6	187 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CASC4	Q6P4E1	433 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ARHGAP11A	Q6P4F7	1023 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ZYG11A	Q6WRX3	759 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	HIST3H2A	Q7L7L0	130 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	AACS	Q86V21	672 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SIAH3	Q8IW03	269 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DBF4B	Q8NFT6	615 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	EXT2	Q93063	718 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SLAMF9	Q96A28	289 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MRPL38	Q96DV4	380 aa	Known RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SAMD8	Q96LT4	415 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CEP295NL	Q96MC4	621 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	NSMCE2	Q96MF7	247 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PLIN2	Q99541	437 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TPPP3	Q9BW30	176 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	RTN4R	Q9BZR6	473 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GOLPH3L	Q9H4A5	285 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	NGB	Q9NPG2	151 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DNAJC11	Q9NVH1	559 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SOHLH2	Q9NX45	425 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TMEM161A	Q9NX61	479 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	UTP6	Q9NYH9	597 aa	Known RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TMOD3	Q9NYL9	352 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TAAR2	Q9P1P5	351 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	COPG2	Q9UBF2	871 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	OR14J1	Q9UGF5	321 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TRMT6	Q9UJA5	497 aa	Known RBP	4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FBXW11	Q9UKB1	542 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GMEB2	Q9UKD1	530 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MAU2	Q9Y6X3	613 aa		4.35	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SMCHD1	A6NHR9	2005 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ELOVL7	A1L3X0	281 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	ARHGAP42	A6NI28	874 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SNAP23	O00161	211 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DVL1	O14640	695 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SYNGR3	O43761	229 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	NUDT21	O43809	227 aa	Known RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MED24	O75448	989 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	NKX2-2	O95096	273 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	AK1	P00568	194 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	TGFA	P01135	160 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GH1	P01241	217 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	KRT6B	P04259	564 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SERPINB2	P05120	415 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PRSS1	P07477	247 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	LINGO3	P0C6S8	592 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	POLR2C	P19387	275 aa	Predicted RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	GLRA2	P23416	452 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DNAJB1	P25685	340 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	HOXD10	P28358	340 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	FRK	P42685	505 aa	Predicted RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CRKL	P46109	303 aa	Known RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	KRT6C	P48668	564 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SUOX	P51687	545 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	DVL1P1	P54792	670 aa	Predicted RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	VCP	P55072	806 aa	Known RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PRKCZ	Q05513	592 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	MZT1	Q08AG7	82 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	IDI1	Q13907	227 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SPOUT1	Q5T280	376 aa	Known RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	PAPD4	Q6PIY7	484 aa	Known RBP	4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	CLEC17A	Q6ZS10	378 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SEPT14	Q6ZU15	432 aa		4.34	□□□□□ -1.71
ATP2B1-208	ENST00000551009	SYVN1	Q86TM6	617 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms