RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SUMF1Q8NBK3 374 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 GDAP1Q8TB36 358 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 CPT1CQ8TCG5 803 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 ATOH1Q92858 354 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-213ENST00000550629 LINC00615Q96LM1 132 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-213ENST00000550629 TMEM109Q9BVC6 243 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 P2RY12Q9H244 342 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 UGT1A7Q9HAW7 530 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 UGT1A10Q9HAW8 530 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 UGT1A8Q9HAW9 530 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 ARFGAP3Q9NP61 516 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 FZD3Q9NPG1 666 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 IARS2Q9NSE4 1012 aaKnown RBP5.62□□□□□ -1.51
SCAF11-213ENST00000550629 TRNAU1APQ9NX07 287 aaKnown RBP5.62□□□□□ -1.51
SCAF11-213ENST00000550629 KLHL42Q9P2K6 505 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 SLC24A2Q9UI40 661 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 GNPTGQ9UJJ9 305 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF180Q9UJW8 692 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 ANKRD6Q9Y2G4 727 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 R4GN57 208 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 WDR87Q6ZQQ6 2873 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 ATG2BQ96BY7 2078 aa5.62□□□□□ -1.51
SCAF11-213ENST00000550629 A0A087X1B8 175 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 C17orf113A0A1B0GUU1 675 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 EXOC1LA0A1B0GW35 172 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 TMEM202A6NGA9 273 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 OR51F1A6NGY5 319 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GOLGA8KD6RF30 607 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GOLGA8TH3BQL2 631 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 EIF3FO00303 357 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 KMOO15229 486 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GRID2O43424 1007 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 KRT38O76015 456 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PRKD3O94806 890 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SCAF4O95104 1147 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CACNA1HO95180 2353 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GASTP01350 101 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 LMNAP02545 664 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 AHSGP02765 367 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 FTH1P02794 183 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CSF2P04141 144 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 WNT1P04628 370 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 OR56A5P0C7T3 313 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ATP1B2P14415 290 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF8P17098 575 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ATP5DP30049 168 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SPRP35270 261 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PTGS2P35354 604 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 MPLP40238 635 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GPR3P46089 330 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 RXRGP48443 463 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ARRB1P49407 418 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CSNK1EP49674 416 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PRLHRP49683 370 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CDKN1CP49918 316 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SERPINB9P50453 376 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CLCNKAP51800 687 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 HK3P52790 923 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 HNRNPKP61978 463 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 B4GALNT1Q00973 533 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PLOD1Q02809 727 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PPARDQ03181 441 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 EML5Q05BV3 1969 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 DMPKQ09013 629 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 FAPQ12884 760 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 RPA4Q13156 261 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 DNAJC3Q13217 504 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CTBP1Q13363 440 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SEMA3AQ14563 771 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 UAP1Q16222 522 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ALG11Q2TAA5 492 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 KHDC1Q4VXA5 237 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PYCR3Q53H96 274 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 TOR2AQ5JU69 321 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PRAMEF14Q5SWL7 426 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 BEND6Q5SZJ8 279 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GRTP1Q5TC63 336 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 LGSNQ5TDP6 509 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 MUC6Q6W4X9 2439 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 MRGPREQ86SM8 312 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 LRRTM4Q86VH4 590 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ZC3HC1Q86WB0 502 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 TDRPQ86YL5 185 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GALNT13Q8IUC8 556 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 DENND6AQ8IWF6 608 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 IQCKQ8N0W5 287 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 FSTL5Q8N475 847 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CLDN19Q8N6F1 224 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF480Q8WV37 535 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 UBLCP1Q8WVY7 318 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SLC44A1Q8WWI5 657 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 OR1E3Q8WZA6 343 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PIGKQ92643 395 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 KCNJ9Q92806 393 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 MTBPQ96DY7 904 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 AHCYL2Q96HN2 611 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 BIRC8Q96P09 236 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PANX3Q96QZ0 392 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 RBBP8Q99708 897 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 MYOCQ99972 504 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms