RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 DRG1Q9Y295 367 aaKnown RBP12.9□□□□□ -0.34
TROAP-211ENST00000549891 LOC102723996A0A087X1L8 192 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 OR5H15A6NDH6 313 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 CCL21O00585 134 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 UNC5CO95185 931 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 WDPCPO95876 746 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 ESR1P03372 595 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 CATP04040 527 aaKnown RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 CYC1P08574 325 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 FMO4P31512 558 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 ZNF75DP51815 510 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 ADARP55265 1226 aaKnown RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 RELAQ04206 551 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 SNX1Q13596 522 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 TSTA3Q13630 321 aaPredicted RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 FAM53BQ14153 422 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 NDUFA9Q16795 377 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 CTSL3PQ5NE16 218 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 HIBCHQ6NVY1 386 aaPredicted RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 LRRC8BQ6P9F7 803 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 SUSD1Q6UWL2 747 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 GDF7Q7Z4P5 450 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 PAQR7Q86WK9 346 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 SLC13A5Q86YT5 568 aaPredicted RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 ZNF808Q8N4W9 903 aaPredicted RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 RNF10Q8N5U6 811 aaKnown RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 AMER3Q8N944 861 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 ITLN2Q8WWU7 325 aaPredicted RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 BIRC8Q96P09 236 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
TROAP-211ENST00000549891 ZNF700Q9H0M5 742 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 STMN3Q9NZ72 180 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 MKL2Q9ULH7 1088 aa12.89□□□□□ -0.35
TROAP-211ENST00000549891 E5RI56 91 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 MYO1CO00159 1063 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 PRAMEF2O60811 474 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 PSIP1O75475 530 aaKnown RBP12.88□□□□□ -0.35
TROAP-211ENST00000549891 VAPBO95292 243 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 C8orf89P0DMQ9 161 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 ITGAMP11215 1152 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 ETS1P14921 441 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 CHRM3P20309 590 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 NMBRP28336 390 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 CA7P43166 264 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 AVPR1BP47901 424 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 CRADDP78560 199 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 BASP1P80723 227 aaKnown RBP12.88□□□□□ -0.35
TROAP-211ENST00000549891 PRDX1Q06830 199 aaKnown RBP12.88□□□□□ -0.35
TROAP-211ENST00000549891 GBX1Q14549 363 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 PCOLCEQ15113 449 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 ZXDCQ2QGD7 858 aaPredicted RBP12.88□□□□□ -0.35
TROAP-211ENST00000549891 TYSND1Q2T9J0 566 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 HKDC1Q2TB90 917 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 ICE2Q659A1 982 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 TMEM205Q6UW68 189 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 LPGAT1Q92604 370 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 CCDC120Q96HB5 630 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 OR2A5Q96R48 311 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
TROAP-211ENST00000549891 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
TROAP-211ENST00000549891 PKDREJQ9NTG1 2253 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 OTOGQ6ZRI0 2925 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 PCNX1Q96RV3 2341 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 A0A0A6YYC8 382 aaPredicted RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 ARHGEF33A8MVX0 844 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 I3L1I5 382 aaPredicted RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 FFAR3O14843 346 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 GPR42O15529 346 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 NIPSNAP2O75323 286 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 MLYCDO95822 493 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 F10P00742 488 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 COX6B1P14854 86 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 PAMP19021 973 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 OGNP20774 298 aaKnown RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 HTR1EP28566 365 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 RPL22P35268 128 aaKnown RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 PNLIPRP1P54315 467 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 YBX1P67809 324 aaKnown RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 ABATP80404 500 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 CDK16Q00536 496 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 ZNF33BQ06732 778 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 CCNG2Q16589 344 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 TTLL9Q3SXZ7 439 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 ZNF425Q6IV72 752 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 XKRXQ6PP77 449 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 ADCK2Q7Z695 626 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 PRUNE1Q86TP1 453 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 ZC3H7AQ8IWR0 971 aaKnown RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 MCOLN3Q8TDD5 553 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 MFSD3Q96ES6 412 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 KIFC1Q9BW19 673 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms