RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 Q8N9G6 341 aaPredicted RBP27.67■■■□□ 2.02
BRF1-213ENST00000548421 OR4K1Q8NGD4 311 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 RFWD2Q8NHY2 731 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 PRR11Q96HE9 360 aaPredicted RBP27.67■■■□□ 2.02
BRF1-213ENST00000548421 AIF1LQ9BQI0 150 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 DPH7Q9BTV6 452 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 RAB33BQ9H082 229 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 TMEM184CQ9NVA4 438 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 DCTN4Q9UJW0 460 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 SNX6Q9UNH7 406 aa27.67■■■□□ 2.02
BRF1-213ENST00000548421 ASXL3Q9C0F0 2248 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 A0A0J9YY10 115 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 H0YIV9 168 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 ZNF195O14628 629 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 FOXD2O60548 495 aaPredicted RBP27.66■■■□□ 2.02
BRF1-213ENST00000548421 KRT6AP02538 564 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 KRT6BP04259 564 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 KRT6CP48668 564 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 AQP5P55064 265 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 PPP1CAP62136 330 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 NAA25Q14CX7 972 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 HIST2H2ACQ16777 129 aaPredicted RBP27.66■■■□□ 2.02
BRF1-213ENST00000548421 AASDHQ4L235 1098 aaPredicted RBP27.66■■■□□ 2.02
BRF1-213ENST00000548421 TCHHL1Q5QJ38 904 aaPredicted RBP27.66■■■□□ 2.02
BRF1-213ENST00000548421 HIST2H2AA3Q6FI13 130 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 IRGCQ6NXR0 463 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 MAVSQ7Z434 540 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 ADCK2Q7Z695 626 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 TRIM73Q86UV7 250 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 KRT78Q8N1N4 520 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 BCAS4Q8TDM0 211 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 NUF2Q9BZD4 464 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 ABCG4Q9H172 646 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 ELOVL6Q9H5J4 265 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 SNX7Q9UNH6 387 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 HCN4Q9Y3Q4 1203 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 PCDHGA11Q9Y5H2 935 aa27.66■■■□□ 2.02
BRF1-213ENST00000548421 ASCC3Q8N3C0 2202 aaKnown RBP27.66■■■□□ 2.02
BRF1-213ENST00000548421 TRPC5OSA6NMA1 111 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 B4GAT1O43505 415 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 SNX3O60493 162 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 TGM1P22735 817 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 GRIA3P42263 894 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 CSNK1G2P78368 415 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 REEP5Q00765 189 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 MEF2AQ02078 507 aaPredicted RBP27.65■■■□□ 2.02
BRF1-213ENST00000548421 BTKQ06187 659 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 SF3A3Q12874 501 aaKnown RBP eCLIP27.65■■■□□ 2.02
BRF1-213ENST00000548421 NKAIN2Q5VXU1 208 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 MED27Q6P2C8 311 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 PIGWQ7Z7B1 504 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 RHBDD1Q8TEB9 315 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 UBE2E3Q969T4 207 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 REPS1Q96D71 796 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 PITHD1Q9GZP4 211 aaPredicted RBP27.65■■■□□ 2.02
BRF1-213ENST00000548421 SPNS1Q9H2V7 528 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 EPHA6Q9UF33 1036 aa27.65■■■□□ 2.02
BRF1-213ENST00000548421 A0A0G2JND7 137 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 PROB1E7EW31 1015 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 MANBAO00462 879 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 NDUFAB1O14561 156 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 ULK1O75385 1050 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 JUNP05412 331 aaKnown RBP27.64■■■□□ 2.02
BRF1-213ENST00000548421 CD59P13987 128 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 IFT88Q13099 833 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 PERM1Q5SV97 790 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 FRG2Q64ET8 278 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 ZNF425Q6IV72 752 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 ZNF473Q8WTR7 871 aaKnown RBP27.64■■■□□ 2.02
BRF1-213ENST00000548421 NCSTNQ92542 709 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 C19orf60Q96EN9 201 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 CNDP2Q96KP4 475 aaKnown RBP27.64■■■□□ 2.02
BRF1-213ENST00000548421 FRG2BQ96QU4 278 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 KCNK13Q9HB14 408 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 ANKMY1Q9P2S6 941 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 RAPGEFL1Q9UHV5 662 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 KLK4Q9Y5K2 254 aa27.64■■■□□ 2.02
BRF1-213ENST00000548421 PIP5K1BO14986 540 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 CAPN5O15484 640 aaPredicted RBP27.64■■■□□ 2.01
BRF1-213ENST00000548421 TNFSF14O43557 240 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 LDOC1O95751 146 aaPredicted RBP27.64■■■□□ 2.01
BRF1-213ENST00000548421 MAGP20916 626 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 GRK3P35626 688 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 HTR6P50406 440 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 INHBCP55103 352 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 AMZ1Q400G9 498 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 TMIGD1Q6UXZ0 262 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 RNF165Q6ZSG1 346 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 DDIASQ8IXT1 998 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 LAS2Q8IYD9 372 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 IFI44Q8TCB0 444 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 USP7Q93009 1102 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 ZDHHC12Q96GR4 267 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 CCT7Q99832 543 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 CCDC3Q9BQI4 270 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 PLCD4Q9BRC7 762 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 ZMYND15Q9H091 742 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 TUBB1Q9H4B7 451 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 PFDN4Q9NQP4 134 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 BTRCQ9Y297 605 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms